DN617456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.716e-17 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = -3 Query: 159 GIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 524 GIV+ RI +L+ + + +YLGRPWK+++ TVI+ + I D+I P GW EW G T Y E N G GA T+ R W +V SA E + +T +++ ++W+ P LGL Sbjct: 469 GIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.514e-17 Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = -3 Query: 159 GIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 524 GIV+ RI A +L+ + + +YLGRPWK ++ T ++ + I D+I P GW+EW G T Y E N G GA + RV W ++ SA E + FT +++ ++W+ LGL Sbjct: 452 GIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.811e-14 Identity = 43/119 (36.13%), Postives = 58/119 (48.74%), Query Frame = -3 Query: 192 NTGIVIQKSRIGATSDLK------PVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 530 N G + + R AT + GS T+LGRPW YSR V S ++V+ P GW++W + NT++YGE++ G GA RV+W S EA F FI G WL Sbjct: 217 NNGSITAQMRTSATEKSGFTFLGCKLTGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWS---KQLSDEEATVFLSKDFIGGKDWL 332
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.963e-13 Identity = 44/122 (36.07%), Postives = 63/122 (51.64%), Query Frame = -3 Query: 192 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 557 AQGR+ ++TG K ++ T L YLGR W +SR V + + ++I P GW+ W T+FYG+++ GAGA GRV W R +T EA+ F +FI GS W+ Sbjct: 272 AQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWI 381
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.662e-12 Identity = 44/122 (36.07%), Postives = 55/122 (45.08%), Query Frame = -3 Query: 192 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 557 AQGR + N G V V G YLGR W+ YSR + S++TDV+ P GW EW+ L Y EH G+G+ TS R KW SA+ Q SFI W+ Sbjct: 214 AQGRTNANDANGFVFINCL---------VHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKWV---KKLSASAVQHLADLSFINRGGWV 323
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.837e-11 Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = -3 Query: 369 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGW 557 AQ R + +G QK I A+SDL P++G+ T+LGRPW+ +SR V M+S I DVI AGW Sbjct: 224 AQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.399e-11 Identity = 40/122 (32.79%), Postives = 60/122 (49.18%), Query Frame = -3 Query: 192 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 557 A GR+ ++N+G IG T + +LGR W+ YSR V + +++TDVI P GW+ ++ T+FYGE+ +G GA S R + + T+ SFI G WL Sbjct: 279 ANGRSSKDENSGFSFVNCTIGGTGHV---------WLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRAP---YVQKLNETQVALLINTSFIDGDQWL 388
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.134e-11 Identity = 42/128 (32.81%), Postives = 56/128 (43.75%), Query Frame = -3 Query: 174 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFP 557 AQGR +P G + V G+ +LGRPW+ YSR + S++TDV+ P GW W+ N L + EH G+GA RVKW S + Q SFI W+ P Sbjct: 219 AQGRTNPYDANGFIFINCL---------VYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKWV---KKLSESAIQNLADLSFINRGGWVEDLPIP 334
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.981e-11 Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = -3 Query: 297 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLF--YGEHQNAGAGA 557 A GR+ + VI KS + A +G++ YLGRPW EY+R V Q+S+T+VI+ GW EW + NT + +GE+ N GAG+ Sbjct: 212 ANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEWSTS-TPNTEYVTFGEYANTGAGS 297
BLAST of DN617456 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.118e-11 Identity = 35/94 (37.23%), Postives = 45/94 (47.87%), Query Frame = -3 Query: 192 VQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 473 + G+ YLGR W YSRTV I D+I P GW +W + +GE+ G GA GRV W + +T E + F FI G WL Sbjct: 288 ISGTGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPWS--KTLT-RDEVKPFLGREFIYGDQWL 378 The following BLAST results are available for this feature:
BLAST of DN617456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617456 ID=DN617456; Name=DN617456; organism=Citrus sinensis; type=EST; length=559bpback to top |