DN617444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_METTH (50S ribosomal protein L10e OS=Methanobacterium thermoautotrophicum GN=rpl10e PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.050e-21 Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 EAARIA N+YM + AG+ +HL++RV+P H++R N M + AGADR+Q GMR AFGKP T A V Q ++++ N A+EALRRA KFP +I++ R Sbjct: 51 EAARIASNRYMQRRAGRMGYHLKIRVYPHHIVRENPMATGAGADRVQDGMRKAFGKPVSTVALVKKNQKIITIETNKKNFKDAKEALRRAAMKFPVPCRIVIDR 154
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_PYRCJ (50S ribosomal protein L10e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.992e-21 Identity = 55/105 (52.38%), Postives = 67/105 (63.81%), Query Frame = -1 Query: 290 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK 604 EAAR +KY+ KY G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ V K + H +EALRRA K P +I+V K Sbjct: 67 EAARQISSKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYVEFKPEHLAHVKEALRRAASKLPIPTRIVVEPK 171
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_THEPD (50S ribosomal protein L10e OS=Thermofilum pendens (strain Hrk 5) GN=rpl10e PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.213e-21 Identity = 54/104 (51.92%), Postives = 67/104 (64.42%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 EAAR NKY+ G+ F LRV V P H+LR NKM++ AGADRLQ GMR +FG P G ARV GQ+++ V+ N HA+EALRRA K P +IIV + Sbjct: 63 EAARQHANKYLTAKVGEANFFLRVAVFPHHILRENKMMAMAGADRLQDGMRLSFGTPVGRAARVEAGQIVMLVKVDAKNIDHAKEALRRAASKIPLPSRIIVEQ 166
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_PYRAE (50S ribosomal protein L10e OS=Pyrobaculum aerophilum GN=rpl10e PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.893e-21 Identity = 54/105 (51.43%), Postives = 66/105 (62.86%), Query Frame = -1 Query: 290 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK 604 EAAR +KY+ KY G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQVL K + H +EALRRA K P +I++ K Sbjct: 67 EAARQMASKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVLFYAEFKPEHLPHIKEALRRAASKLPLPTRIVIEPK 171
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_THENV (50S ribosomal protein L10e OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl10e PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.587e-20 Identity = 52/105 (49.52%), Postives = 65/105 (61.90%), Query Frame = -1 Query: 290 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK 604 EAAR KY++KY G ++LR+ P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ K + H +EALRRA K P +I++ K Sbjct: 67 EAARQMAYKYLSKYVGDANYYLRLEAVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEAGQVIFYAEFKPEHVAHMKEALRRASTKLPLPTRIVIEAK 171
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_PYRAR (50S ribosomal protein L10e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl10e PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.379e-20 Identity = 52/105 (49.52%), Postives = 65/105 (61.90%), Query Frame = -1 Query: 290 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK 604 EAAR +KY+ KY G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQ+L K + H +EA RRA K P +I++ K Sbjct: 67 EAARQMASKYLTKYVGDANYYLRLNVIPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQILFYAEFKPEHLAHIKEAFRRAASKLPLPTRIVIEPK 171
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_PYRIL (50S ribosomal protein L10e OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl10e PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = -1 Query: 290 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRK 604 EAAR KY++KY G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ + + H +EALRRA K P +I++ K Sbjct: 67 EAARQMAYKYLSKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYAEFRPEHIAHIKEALRRAASKLPLPTRIVIETK 171
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_ARCFU (50S ribosomal protein L10e OS=Archaeoglobus fulgidus GN=rpl10e PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.764e-20 Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 EAAR+ NKY+++ AG + L++R+ P H+LR +KM AGADR+ GMR AFGKP G ARV G ++SV K + A+EALRRA K P KI+V + Sbjct: 62 EAARVVANKYVSRRAGASNYKLKLRIFPHHILREHKMAVGAGADRISQGMRAAFGKPVGRAARVKPGTKIMSVWVKPEHFEIAKEALRRAAMKMPTPTKIVVEK 165
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_METJA (50S ribosomal protein L10e OS=Methanocaldococcus jannaschii GN=rpl10e PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.190e-19 Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 EAAR+A NKY+ K G+ + ++RV+P +LR +KM + AGADR+ GMR AFGKP GT ARV GQ +L+V A+EALRRA K P +I++ + Sbjct: 64 EAARVAANKYLTKMCGRMGYKFQIRVYPHQILREHKMATGAGADRISDGMRLAFGKPIGTAARVKEGQAILTVWVNPDKFPAAKEALRRAAMKLPVPCRIVIEQ 167
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_META3 (50S ribosomal protein L10e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl10e PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.323e-19 Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 E+ARI NKY G+ + ++RV+P VLR NKM S AGADR+ GMR +FGK GT ARV GQ ++++ N HA+EALRR K P + KI++ + Sbjct: 63 ESARIVGNKYTQNKCGRLGYKFQIRVYPHQVLRENKMASGAGADRISDGMRLSFGKAVGTAARVRKGQKIITISTTPENVIHAKEALRRCNMKMPVKCKIVIGK 166 The following BLAST results are available for this feature:
BLAST of DN617444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617444 ID=DN617444; Name=DN617444; organism=Citrus sinensis; type=EST; length=604bpback to top |