DN617444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_METM5 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl10e PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.791e-17 Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 E++RIA NKY+ G+ + +RV+P +LR NKM + AGADR+ GMR +FGK GT A+V GQ ++++ + A+EALRR K P KI+V++ Sbjct: 63 ESSRIAGNKYIMGECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPERFYAAKEALRRCSMKLPTACKIVVTK 166
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_METMJ (50S ribosomal protein L10e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.736e-16 Identity = 47/104 (45.19%), Postives = 61/104 (58.65%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 EAARI N+ + K G+ FHL++R P HVLR NK + AGADR+ GMR AFGK GT ARV GQ + SV A+ +L+R +K P +I+ R Sbjct: 63 EAARIGINRQLQKEVGRANFHLKIRTFPHHVLRENKQATGAGADRVSEGMRLAFGKAVGTAARVEKGQKVFSVWTSPQYVDKAKVSLKRGIYKLPTPARIVEER 166
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_METST (50S ribosomal protein L10e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl10e PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.267e-16 Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = -1 Query: 272 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKF 604 EAARIA N+Y+ + GK + L++R +P H++R N M + AGADR+Q+GMRGAFGK + A V Q +++ + + A+ AL RA K P K+++ + +F Sbjct: 51 EAARIAANRYLQRTTGKLGYRLKIRTYPHHIVRENPMATGAGADRVQSGMRGAFGKAVSSEALVRANQKIITAYVQVKDFEKAKVALNRAAMKLPVTCKLVIDKGHDLVQF 161
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_METBU (50S ribosomal protein L10e OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl10e PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.960e-16 Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 EAARI N+ M AG+ FH+++RV+P VLR NK + AGADR+ +GMR A+GK T ARV+ Q + ++ + A++ALRRA K P I+V + Sbjct: 63 EAARITANRAMTTAAGRSGFHMKLRVYPHEVLRENKQATGAGADRVSSGMRAAYGKNVSTAARVSARQKIFTISVNKEHFIIAKDALRRAGQKLPTPVTIVVDQ 166
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_THESM (50S ribosomal protein L10e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl10e PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.125e-15 Identity = 43/95 (45.26%), Postives = 57/95 (60.00%), Query Frame = -1 Query: 320 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFP 604 EAAR N+Y++K G+ FH ++RV+PF VLR N M + ADR GMR FGKP G AR+ Q +L+VR + A A++RA KFP Sbjct: 63 EAARTQLNRYLSKNVGRSNFHYKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKILTVRVNKQHLKFALAAMKRASMKFP 157
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_METMA (50S ribosomal protein L10e OS=Methanosarcina mazei GN=rpl10e PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.469e-15 Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = -1 Query: 299 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIV 604 EAARI N+++ AGK F++++RV+P VLR NK + AGADR+ +GMR AFGK GT ARV Q L +V + N A++AL A K P +I++ Sbjct: 64 EAARITANRHLVADAGKMGFYMKLRVYPHEVLRENKQATGAGADRVSSGMRRAFGKNVGTAARVNSMQKLFTVAVEKQNFPAAKKALWHAGQKLPTPVRIVI 165
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_METS5 (50S ribosomal protein L10e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl10e PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.919e-15 Identity = 45/104 (43.27%), Postives = 66/104 (63.46%), Query Frame = -1 Query: 299 EAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVA-IGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIV 604 EAAR+ K M G + F+L V +P HV+R NKM++ AGADRLQ GMR +FGKP GT AR+ +G +++++R K + A++A + A K P +I+V Sbjct: 63 EAARVIALKQMTSMVGNETDFYLYVTKYPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARITKLGDLIMAIRVKKEHLEFAKKAFKVASSKLPLDTEIVV 166
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_METLZ (50S ribosomal protein L10e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl10e PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.919e-15 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = -1 Query: 299 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIV 604 EAARI N+ + K G++ FHL++R +P HVLR +K + AGADR+ GMR AFGK GT ARVA Q + +V A++AL + +K P ++IV Sbjct: 63 EAARINMNRRLMKTVGRNNFHLKIRAYPHHVLREHKQATGAGADRVSEGMRLAFGKAVGTAARVAPRQRVFTVWTTPQYVDQAKDALLHSGYKLPTPVRVIV 164
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_THEON (50S ribosomal protein L10e OS=Thermococcus onnurineus (strain NA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.273e-15 Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = -1 Query: 320 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFP 604 EA RI N+Y+ K G+ +H ++RV+PF VLR N M + ADR GMR FGKP G ARV Q +L+V + + A EA+RRA K P Sbjct: 63 EAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARVKKDQKILTVWVNEGHLKFALEAMRRAAMKLP 157
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_METAC (50S ribosomal protein L10e OS=Methanosarcina acetivorans GN=rpl10e PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.273e-15 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = -1 Query: 299 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIV 604 EAARI N+++ GK F++++RV+P V+R NK + AGADR+ +GMR AFGK GT ARV Q + +V + N A+EAL A K P +I+V Sbjct: 64 EAARITANRHLVADTGKMGFYMKLRVYPHEVIRENKQATGAGADRVSSGMRRAFGKNVGTAARVKPMQKIFTVAVEKQNFKAAKEALWHAGQKLPTPCRIVV 165 The following BLAST results are available for this feature:
BLAST of DN617444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617444 ID=DN617444; Name=DN617444; organism=Citrus sinensis; type=EST; length=604bpback to top |