DN617444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_SULIM (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = -1 Query: 305 EAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 604 EA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 63 EAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_SULIL (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = -1 Query: 305 EAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 604 EA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 63 EAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_SULIK (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = -1 Query: 305 EAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 604 EA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 63 EAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_SULIA (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = -1 Query: 305 EAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 604 EA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 63 EAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_SULSO (50S ribosomal protein L10e OS=Sulfolobus solfataricus GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.053e-13 Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = -1 Query: 305 EAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 604 EA R K ++K G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G+ L+ ++ K + A+EAL+ A K P R +I Sbjct: 63 EAVRTLTLKTLSKKTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGETLIVIKVKKEHLEFAKEALKIASKKLPLRTRI 164
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_HALWD (50S ribosomal protein L10e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.053e-13 Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = -1 Query: 296 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRA--KFKFPGR------QKIIVS 604 E+AR++ N+ M K G+D + + +R P +LR NK + AGADR+ GMR AFGKP GT AR+ + + ++ C+ ++ A++ LRRA K P R QK+++S Sbjct: 66 ESARLSANRTMLKQVGQDNYKMVLRKFPHQILRENKQATGAGADRVSDGMRQAFGKPVGTAARIQQNERVFTIYCEVDDASVAKDGLRRAYNKMSPPCRIDVEKGQKLLIS 176
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_HALSA (50S ribosomal protein L10e OS=Halobacterium salinarium GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.375e-13 Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 EAAR++ N+++ K G+ + +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ + +EA RRA K KI V R Sbjct: 66 EAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_HALS3 (50S ribosomal protein L10e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.375e-13 Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 EAAR++ N+++ K G+ + +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ + +EA RRA K KI V R Sbjct: 66 EAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_SULTO (50S ribosomal protein L10e OS=Sulfolobus tokodaii GN=rpl10e PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.796e-13 Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = -1 Query: 305 EAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 604 EAAR+ K + G D F L V +P HV+R NKM++ AGADRLQ GMR +FGKP GT AR+ +G +++ + K + A++A A K P + KI Sbjct: 63 EAARVLALKQLTNKTGSDQNFALIVLKYPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARIERLGDIIMIAKVKKEHLEIAKKAFEAAASKIPLKTKI 164
BLAST of DN617444 vs. ExPASy Swiss-Prot
Match: RL10_HALLT (50S ribosomal protein L10e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl10e PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.593e-12 Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = -1 Query: 293 EAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 604 E++R++ N+++ K G+ + + +R P V+R NK + AGADR+ GMR AFGKP GT AR+ ++ + C + +EA RRA K +I V R Sbjct: 66 ESSRLSANRHLIKELGEGNYKMTLRKFPHQVIRENKQATGAGADRVSDGMRQAFGKPVGTAARLNKDDIVFTAYCDVEQASVVKEAFRRAYNKLSPPCRITVDR 169 The following BLAST results are available for this feature:
BLAST of DN617444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617444 ID=DN617444; Name=DN617444; organism=Citrus sinensis; type=EST; length=604bpback to top |