DN617443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617443 vs. ExPASy Swiss-Prot
Match: RL34A_YEAST (60S ribosomal protein L34-A OS=Saccharomyces cerevisiae GN=RPL34A PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.764e-18 Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 31 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 315 M QR+T+R+R+ Y T+SN+ +VVKTPGG L Q KK A+ PKC G +QGI LRP +Y + + + +TV+RAYGG V+ERIIRAF Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPRQY--ATVSKTHKTVSRAYGGSRCANCVKERIIRAF 93
BLAST of DN617443 vs. ExPASy Swiss-Prot
Match: RL34B_YEAST (60S ribosomal protein L34-B OS=Saccharomyces cerevisiae GN=RPL34B PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.916e-18 Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 31 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 315 M QR+T+R+R+ Y T+SN+ +VVKTPGG L Q KK A+ PKC G +QGI LRP +Y + + + +TV+RAYGG V+ERI+RAF Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPRQY--ATVSKTHKTVSRAYGGSRCANCVKERIVRAF 93
BLAST of DN617443 vs. ExPASy Swiss-Prot
Match: RL34_DANRE (60S ribosomal protein L34 OS=Danio rerio GN=rpl34 PE=2 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.339e-15 Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 31 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPK--CPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 315 MVQRLTYR+R SY T SN+ R+ +TPG ++VY TKK PK C + R++GI +RP RL + ++ V+RAYGG + VR+RI RAF Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKTGKSPKSACGICPGRLRGIRAVRPQVL--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
BLAST of DN617443 vs. ExPASy Swiss-Prot
Match: RL34_HUMAN (60S ribosomal protein L34 OS=Homo sapiens GN=RPL34 PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 2.283e-15 Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 31 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPK--CPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 315 MVQRLTYR+R SY T SN+ R+ +TPG ++VY TKK PK C V R++G+ +RP RL + ++ V+RAYGG + VR+RI RAF Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVL--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
BLAST of DN617443 vs. ExPASy Swiss-Prot
Match: RL34_MOUSE (60S ribosomal protein L34 OS=Mus musculus GN=Rpl34 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 2.982e-15 Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 31 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPK--CPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 315 MVQRLTYR+R SY T SN+ R+ +TPG ++VY TKK PK C V R++G+ +RP RL + ++ V+RAYGG + VR+RI RAF Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVL--MRLSKTQKHVSRAYGGSMCAKCVRDRIKRAF 95
BLAST of DN617443 vs. ExPASy Swiss-Prot
Match: RL34_ICTPU (60S ribosomal protein L34 OS=Ictalurus punctatus GN=rpl34 PE=3 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 6.644e-15 Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 31 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPK--CPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 315 MVQRLTYR+ SY T SN+ R+ +TPG ++VY TKK PK C + R++GI +RP RL + ++ V+RAYGG + VR+RI RAF Sbjct: 1 MVQRLTYRRTVSYNTTSNKTRLSRTPGNRIVYLYTKKTGKAPKSACGICPGRLRGIRAVRPQVL--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
BLAST of DN617443 vs. ExPASy Swiss-Prot
Match: RL34_ENCCU (60S ribosomal protein L34 OS=Encephalitozoon cuniculi GN=RPL34 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.412e-11 Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 34 VQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 315 ++ + K +Y T+SN+ R V+TP GKLV + KK + +C + I +RPAE+ R ++ + R VNR YG G VRE+II AF Sbjct: 1 MKNVLIHKGATYKTRSNRRRKVRTPSGKLVNRRVKKHSKKHRCHECNAILGSIARMRPAEFSRQKV--SARRVNRPYGATTCGRCVREKIISAF 92 The following BLAST results are available for this feature:
BLAST of DN617443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617443 ID=DN617443; Name=DN617443; organism=Citrus sinensis; type=EST; length=581bpback to top |