DN617437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: MOT1_SCHPO (Probable helicase mot1 OS=Schizosaccharomyces pombe GN=mot1 PE=1 SV=4) HSP 1 Score: 136.346 bits (342), Expect = 1.082e-31 Identity = 77/221 (34.84%), Postives = 118/221 (53.39%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRG-----------ITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF--QISGEXDQQE----------VVQQLHKVLRPFLLRRLKSDVEKGLPP 594 LGKTLQTI ++ H R P ++V P + G+W E+ + P L+ ++G P ER IR + K DV VTS+++ + L + W Y ++DE H IKN + L+K ++ + +RL+++GTP+QNN+ ELWSL +FL+P + +TF E F I+ D + ++ +HK + PF+LRRLK DV LPP Sbjct: 1387 LGKTLQTICIVASDHYNRQKLFEESGSPKFAHVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAKIRSKMK---KSDVVVTSYDICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADLPP 1604
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: MIT1_SCHPO (Chromatin remodeling factor mit1 OS=Schizosaccharomyces pombe GN=mit1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.028e-29 Identity = 73/203 (35.96%), Postives = 119/203 (58.62%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAI------KEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+Q IS + L +R P +V+ P +T+ NW E++++ P L+ +G+ + R +R+ L+ K V++ + I +E S LR+F W+ +I+DE R+KN+ S L + ++++LL+TGTPLQNN+ EL++LL FL P ++AE + I E V +LH++L+PF LRR+KS+V P Sbjct: 585 LGKTVQVISFISVLF-YRHKCFPVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKHVSTHVLVISASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVRELFNLLQFLNPMKINAAELEKRYSII-----DTEKVTELHQILKPFFLRRVKSEVLDNFP 781
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: YFC1_SCHPO (Uncharacterized ATP-dependent helicase C25A8.01c OS=Schizosaccharomyces pombe GN=SPAC25A8.01c PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.911e-28 Identity = 78/210 (37.14%), Postives = 117/210 (55.71%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLV-AGKFDVCVTSFEMAIKEKSA---LRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFS-SAETFDEWFQI--SGEXD------QQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT QTI+ L + + I GPH+V+AP ST+ NW+ E +FCP L+ + G+ ER IRE + ++V +T++ +A K+ LR + + DE H +KN S + + ++R+L+TGTPLQNNL EL SLL F+LP +F ++ D F + S E D ++ V + ++ PF+LRR KS V LP Sbjct: 416 LGKTCQTIAFFSLLMD-KNINGPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDSYNVMLTTYRLAATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKELISLLAFILPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQRVSRAKMMMAPFVLRRKKSQVLDALP 624
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: EP400_HUMAN (E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.048e-26 Identity = 67/199 (33.67%), Postives = 106/199 (53.27%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQ---QEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q I+ +L G GPH+VV + W E++R+CP L+ + ++G+ E + R+ F VC+TS+ + +A R W+ ++IDE R+K + + + RLL+ +PL N ELW++++FL+P I S + E Q +VV +LH+V +PF+LRR K DVEK L Sbjct: 1120 LGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHFLVPGI--SRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQL 1316
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: BTAF1_HUMAN (TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.788e-26 Identity = 72/223 (32.29%), Postives = 115/223 (51.57%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRG-----------ITGPHMVVAPKSTLGNWMNEIRRFCP--VLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF--------QISGEXDQQE----VVQQLHKVLRPFLLRRLKSDVEKGLPP 594 LGKTLQ+I +L H R + P +VV P + G+W++E+ +FC L + + G P ER ++ + + ++ V S+++ + R + Y I+DE H IKN + LSK ++ NYR++++GTP+QNN+ ELWSL +FL+P + F + +QE + LH+ + PFLLRR+K DV + LPP Sbjct: 1295 LGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVK---RHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPP 1514
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: EP400_MOUSE (E1A-binding protein p400 OS=Mus musculus GN=Ep400 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26 Identity = 64/199 (32.16%), Postives = 108/199 (54.27%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQ---QEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q I+ +L G GPH+VV + W E++R+CP L+ + ++G+ E + R+ F +C+TS++ + +A R W+ +++DE R+K + + + RLL+ PL N ELW++++FL+P I +F + E +Q ++V +LH+V +PF+LRR K DVEK L Sbjct: 1119 LGKTVQIIAFFAHLACNEGNWGPHLVVMRSCNILKWELELKRWCPGLKTLSYVGSHRELKAKRQEWTEPNNFHICITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGMTERHWEAIFKLQSQQRLLLIDVPLHNTFLELWTMVHFLIPGISRPYLSFP--LKAPNEENQDYYHKMVIRLHRVTQPFILRRTKRDVEKQL 1315
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: Y018_MYCGE (Uncharacterized ATP-dependent helicase MG018 OS=Mycoplasma genitalium GN=MG018 PE=3 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 5.203e-26 Identity = 67/197 (34.01%), Postives = 108/197 (54.82%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT Q I + ++ P +++ P S L NW +E ++F P ++ V GN +ER + E+L K + + SF + + + + + Y++IDEA IKNENS ++K + N+ L +TGTP++N L +LWS +F+LP + + F + F+ + E Q+L K PF+LRR K+ V K LP Sbjct: 607 LGKTAQVIFAMLDSYQSTKSLLPSLIIVPASLLLNWKSEFQKFAPHVKIVTANGNFKERSQVYESL----KNQILLMSFNVLRSDIKWISQKKFHYVVIDEAQGIKNENSTVTKAAKKIKGNFCLALTGTPIENRLLDLWSCFDFVLPNFLGNKKQFSDQFE---KEKNDESFQKLMKKTSPFILRRTKNKVLKELP 796
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: ERCC6_HUMAN (DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 9.813e-25 Identity = 69/221 (31.22%), Postives = 111/221 (50.23%), Query Frame = 1 Query: 1 LGKTLQTISLLGYL-----------HEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLL--VAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQI---SGEXDQQEVVQ---------QLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q I+ L L + F G+ GP ++V P + + W+ E + P R V L H +E L+ VA + +TS+ + + R+ W Y+I+DE H+I+N N+ ++ + + T +R++++G+P+QNNL ELWSL +F+ P + F E F + G VQ L + P+LLRR+KSDV+ L Sbjct: 536 LGKTIQIIAFLAGLSYSKIRTRGSNYRFEGL-GPTVIVCPTTVMHQWVKEFHTWWPPFR-VAILHETGSYTHKKEKLIRDVAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSL 754
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: YWQA_BACSU (Uncharacterized ATP-dependent helicase ywqA OS=Bacillus subtilis GN=ywqA PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 4.870e-24 Identity = 66/198 (33.33%), Postives = 106/198 (53.54%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGK-FDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEV-VQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q I+ ++ E PH+++AP S LGNW E++ F P L G RR ++ + DV +TS+ ++ + L +W I +DEA IKN ++ S+ +R + + ++GTP++N L ELWS+ +F+ S F + + + E D+ E + QL +++RPFLLRR K D E L Sbjct: 479 LGKTIQMIAYFLHVKESGRQKTPHLIIAPTSVLGNWQRELQTFAPDLSVALHYG---PRRPKGDDFAAHYENADVVLTSYGLSHADTEELSSVTWNTICLDEAQNIKNAHTKQSRAIRKLKGLHHIALSGTPMENRLTELWSIFDFMNKGYLGSLTGFHKRYVLPIEKDRDEKRIGQLQQLIRPFLLRRTKRDEEVAL 673
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: ERC6L_DANRE (DNA excision repair protein ERCC-6-like OS=Danio rerio GN=ercc6l PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.157e-23 Identity = 64/212 (30.19%), Postives = 115/212 (54.25%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSAL-----RRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLP-EIFSSAETFDEWFQ--ISGEXDQQ----------EVVQQLHKVLRPFLLRRLKSDVEK 582 LGKT+Q IS L +++ + ++V P S + NW+ E ++ P +R +F G+ + R+ R + K V +T+++M I L R F W Y+I+DEAH+IK ++ +K+ R+L+TGTP+QNNL E+W+L +F + +++TF ++ I+ ++ + Q L +++P+ LRR K+DV++ Sbjct: 135 LGKTIQVISFLSGMYDAE-LANHTLLVMPTSLIKNWVREFAKWTPGMRVKEFHGSSKTERN-RNLERIQRKGGVIITTYQMLINNYEQLGSNGHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVLLTGTPVQNNLREMWALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALGLRISQNLTDIIKPYFLRRTKADVQQ 344 The following BLAST results are available for this feature:
BLAST of DN617437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617437 ID=DN617437; Name=DN617437; organism=Citrus sinensis; type=EST; length=595bpback to top |