DN617437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SWR1_CANGA (Helicase SWR1 OS=Candida glabrata GN=SWR1 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.115e-44 Identity = 90/218 (41.28%), Postives = 136/218 (62.39%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEI---------FSSAETFDEWF--------QISGEXDQ----QEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTISLL YL + GPH++V P S L NW E +RF P + + + GNP++R+ R+ F VC+ S+++ ++++ + +R W+Y+++DEAH IKN S + + +NT R+L+TGTPLQNN+ ELWSLL FL+P+ F+ + F +WF + G +Q + V++LH+VLRP+LLRRLK+DVEK +P Sbjct: 657 LGKTIQTISLLSYLACEKHNWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGNPQQRKEKRKGWNKPDAFHVCIVSYQLIVQDQHSFKRKKWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRILLTGTPLQNNIAELWSLLYFLMPQTVIDGQKVSGFADLDAFQQWFGRPVDKLIETGGTYEQDNETKRTVEKLHQVLRPYLLRRLKADVEKQIP 874
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD1_CHICK (Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus GN=CHD1 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.484e-44 Identity = 96/202 (47.52%), Postives = 134/202 (66.34%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAG-----KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTIS L YL + GP ++V P STL +W EI+ + P + AV +LG+ R IR + + KF++ +T++E+ +K+KS L +W +I +DEAHR+KN++SLL KT+ + +N+RLLITGTPLQN+L ELWSLL+F++PE FSS E F+E ++ LHK L PFLLRR+K DVEK LP Sbjct: 506 LGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEE----EHGKGREYGYASLHKELEPFLLRRVKKDVEKSLP 703
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SWR1_YEAST (Helicase SWR1 OS=Saccharomyces cerevisiae GN=SWR1 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.244e-44 Identity = 89/218 (40.83%), Postives = 134/218 (61.47%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEI---------FSSAETFDEWF------------QISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTISLL YL + GPH++V P S L NW E +RF P + + + G+P++R+ R+ F VC+ S+++ ++++ + +R W+Y+++DEAH IKN S + + +NT RLL+TGTPLQNNL ELWSLL FL+P+ F+ + F +WF + + ++ V +LH+VLRP+LLRRLK+DVEK +P Sbjct: 725 LGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRPYLLRRLKADVEKQMP 942
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SWR1_ASHGO (Helicase SWR1 OS=Ashbya gossypii GN=SWR1 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 5.533e-44 Identity = 88/217 (40.55%), Postives = 132/217 (60.83%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEI---------FSSAETFDEWF-----------QISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTI+LL YL + GPH+++ P S L NW E +RF P + + + G+P++R+ R F VC+TS+++ + ++ + +R W+Y+I+DEAH IKN S + + +NT RLL+TGTPLQNN+ ELWSLL FL+P+ F+ + F +WF + + + V +LH+VLRP+LLRRLK+DVEK +P Sbjct: 700 LGKTIQTIALLAYLACEKENWGPHLIIVPTSVLLNWEMEFKRFAPGFKVLSYYGSPQQRKEKRRGWNKLDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFKSTRWQALLNFNTRRRLLLTGTPLQNNIAELWSLLYFLMPQTALENGKISGFADLDAFQQWFGKPVDKIIAANDSEHDDETRRTVSKLHQVLRPYLLRRLKADVEKQMP 916
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SWR1_NEUCR (Helicase swr-1 OS=Neurospora crassa GN=swr-1 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 7.227e-44 Identity = 95/213 (44.60%), Postives = 134/213 (62.91%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEI-----FSSAETFDEWF-----QI--SG----EXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTI+LL +L + GPH+V+ P S + NW E +++CP + + + GN EER+ R+ ++VC+TS++M ++++ RR W Y+I+DEAH IKN S +T+ +NT RLL+TGTPLQNNL ELWSLL FL P F F WF QI SG + + + ++ +LHKVLRP+LLRRLK+DVEK +P Sbjct: 974 LGKTIQTIALLAHLACHHEVWGPHLVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWNNDDVWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTQARLLLTGTPLQNNLTELWSLLYFLAPPENGEGGFVDLTEFHNWFARPESQILESGREQLDDEARAIIAKLHKVLRPYLLRRLKADVEKQMP 1186
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD2_HUMAN (Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 7.227e-44 Identity = 92/202 (45.54%), Postives = 130/202 (64.36%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAG-----KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTIS L YL + GP ++V P STL +W E + P + V ++G+ R IRE + KF+ +T++E+ +K+K+ L +W ++ +DEAHR+KN++SLL KT+ + +N+RLLITGTPLQN+L ELWSLL+F++PE F E F+E ++ Q LHKVL PFLLRR+K DVEK LP Sbjct: 513 LGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEE----DHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 710
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SWR1_GIBZE (Helicase SWR1 OS=Gibberella zeae GN=SWR1 PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.233e-43 Identity = 92/213 (43.19%), Postives = 138/213 (64.79%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEI-----FSSAETFDEWF-----QI--SG----EXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTI+LL +L + GPH+V+ P S + NW E +++CP + + + G+ EER+ R+ ++VC+TS+++ ++++ +R W Y+I+DEAH IKN S +T+ +NT RLL+TGTPLQNNL ELWSLL FL+P F+ + F +WF QI SG + + + ++ +LHKVLRP+LLRRLK+DVEK +P Sbjct: 840 LGKTIQTIALLAHLACTHEVWGPHLVIVPTSVMLNWEMEFKKWCPGFKILAYYGSQEERKRKRQGWNNDDIWNVCITSYQLVLQDQQVFKRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTQARLLLTGTPLQNNLTELWSLLFFLMPAENGVGGFADLQEFHDWFAKPESQILESGREQMDDEARAIISKLHKVLRPYLLRRLKADVEKQMP 1052
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: BRM_ARATH (ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.233e-43 Identity = 88/212 (41.51%), Postives = 134/212 (63.21%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEW----FQISG-----EXDQQE------VVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+Q ++L+ YL EF+G GPH+++ P + L NW +E+ + P + + ++G ++R + + A KF+V VT++E + ++S L + W+YIIIDEA R+K+ S+L++ + Y RLL+TGTPLQN+L ELWSLLN LLP++F + + F +W FQ G E D E V+ +LH++L PF+LRR DVE LP Sbjct: 1010 LGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLP 1221
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SSL1_CAEEL (Helicase ssl-1 OS=Caenorhabditis elegans GN=ssl-1 PE=2 SV=4) HSP 1 Score: 175.637 bits (444), Expect = 1.610e-43 Identity = 88/204 (43.14%), Postives = 131/204 (64.22%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQ--ISGEXD-----QQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTISLL ++ I GPH++V P S + NW E +++CP L+ + + G +ER R+ + F VC+TS++ ++ A ++ +W+Y+I+DEA IKN S + + RLL+TGTPLQN+L ELWSL++FL+P IFSS + F +WF ++G + ++ +LHKVLRPF+LRRLK +VEK LP Sbjct: 587 LGKTIQTISLLAHMACSESIWGPHLIVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAEKRKGWMKPNCFHVCITSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRRLKKEVEKQLP 790
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SWR1_DEBHA (Helicase SWR1 OS=Debaryomyces hansenii GN=SWR1 PE=3 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43 Identity = 94/232 (40.52%), Postives = 132/232 (56.90%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFL---------LPEIFSSAETFDEWF-----------------QISGEXDQ---------QEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTISLL YL I GPH++V P S + NW E ++F P + + + G+P++R R+ F VC+TS+++ + + + +R WRY+I+DEAH IKN S + + +NT RLL+TGTPLQNNL ELWSLL FL +P+ F++ E F WF + E D+ + V +LH+VLRP+LLRRLK DVEK +P Sbjct: 810 LGKTIQTISLLAYLAAEHHIWGPHLIVVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRKGWNKPNAFHVCITSYQLVVHDHQSFKRRRWRYMILDEAHNIKNFRSARWRALLNFNTENRLLLTGTPLQNNLMELWSLLYFLMPSSKVNQAMPDGFANLEDFQTWFGRPVDKILEKTSNGTSSDVIDENDKTTQRMDEETRNTVSRLHQVLRPYLLRRLKKDVEKQMP 1041 The following BLAST results are available for this feature:
BLAST of DN617437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617437 ID=DN617437; Name=DN617437; organism=Citrus sinensis; type=EST; length=595bpback to top |