DN617437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SWR1_ASPFU (Helicase swr1 OS=Aspergillus fumigatus GN=swr1 PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43 Identity = 90/216 (41.67%), Postives = 134/216 (62.04%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLP--------EIFSSAETFDEWFQISGE-----------XDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTI+LL +L + GPH+VV P S + NW E +++CP + + + G+ EERR R+ ++V +TS+++ ++++ L+R +W Y+++DEAH IKN S +T+ + T RLL+TGTPLQNNL ELWSLL FL+P E F+ F EWF+ E + + VV +LH +LRP++LRRLK+DVEK +P Sbjct: 859 LGKTIQTIALLAHLAVEHEVWGPHLVVVPTSVILNWEMEFKKWCPGFKIMTYYGSIEERRQKRKGWTDDTSWNVLITSYQLVLQDQQVLKRRNWHYMVLDEAHNIKNFRSQKWQTLLTFRTRARLLLTGTPLQNNLTELWSLLFFLMPSDGDGTGIEGFADLRNFSEWFRRPVEQILEHGRETMDDETKRVVTKLHTILRPYILRRLKADVEKQMP 1074
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_CRYNE (Putative DNA helicase INO80 OS=Cryptococcus neoformans GN=INO80 PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43 Identity = 85/211 (40.28%), Postives = 136/211 (64.45%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIR-------ENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXD--------QQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+ISLL YL E + GP +V+AP STL NW E+ RF P L+A+ + G+P++R +R + F + +TS+++A++++ L+ W+Y+I+DEA IK+ +S K++ + RLL+TGTP+QN++HELW+LL+F++P++F S E F EWF E + E +++LH +L+PF+LRR+K V+K L Sbjct: 900 LGKTIQSISLLAYLAEHHNLWGPFLVIAPASTLHNWQQELARFVPRLKALPYWGSPKDRETLRKIWSRKNQTFSEDSPFHILITSYQLAVQDEKYLQGMKWQYMILDEAQAIKSSSSARWKSLLSLHCRNRLLLTGTPIQNSMHELWALLHFIMPQLFDSHEEFAEWFSKDIESSSGGVTGNLKPEQLKRLHMILKPFMLRRVKKHVQKEL 1110
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD1_MOUSE (Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1 PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43 Identity = 94/202 (46.53%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAG-----KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTIS L YL + GP ++V P STL +W EI+ + + AV +LG+ R IR + + KF++ +T++E+ +K+K+ L +W +I +DEAHR+KN++SLL KT+ + +N+RLLITGTPLQN+L ELWSLL+F++PE FSS E F+E ++ LHK L PFLLRR+K DVEK LP Sbjct: 508 LGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEE----EHGKGREYGYASLHKELEPFLLRRVKKDVEKSLP 705
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD1_HUMAN (Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1 PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 4.684e-43 Identity = 94/202 (46.53%), Postives = 132/202 (65.35%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAG-----KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTIS L YL + GP ++V P STL +W EI+ + + AV +LG+ R IR + KF++ +T++E+ +K+K+ L +W +I +DEAHR+KN++SLL KT+ + +N+RLLITGTPLQN+L ELWSLL+F++PE FSS E F+E ++ LHK L PFLLRR+K DVEK LP Sbjct: 510 LGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEE----EHGKGREYGYASLHKELEPFLLRRVKKDVEKSLP 707
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD1L_DANRE (Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio GN=chd1l PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.044e-42 Identity = 81/197 (41.12%), Postives = 128/197 (64.97%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT QTISLL Y + GP +V+ P + L NW E+ RFCP L + + G+ E+R +++NL +F V +T++EM +K+ L+ + W+ +++DEAHR+KN+ SLL +T++ + +R+L+TGTP+QNNL E++SLL F+ P +F D + + +V +LH+VL+PFLLRR+K++V LP Sbjct: 64 LGKTCQTISLLAYARGSLKMNGPFLVLCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSDPRFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYADIQTEPALVDELHQVLQPFLLRRVKAEVAAELP 260
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SWR1_SCHPO (Helicase swr1 OS=Schizosaccharomyces pombe GN=swr1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.036e-42 Identity = 86/214 (40.19%), Postives = 131/214 (61.21%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLP-------EIFSSAETFDEWFQISGE----------XDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTI+LL +L + GPH+++ P S + NW E ++F P + + + GNP+ER+ R + VC+TS+++ +++ RR W+Y+I+DEAH IKN S +++ +N +RLL+TGTPLQNNL ELWSLL FL+P F++ + F +WF + + V +LH+VLRP+LLRRLK++VEK +P Sbjct: 476 LGKTIQTIALLAHLACEKENWGPHLIIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRSGWYKPDTWHVCITSYQLVLQDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLVELWSLLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNTVAKLHRVLRPYLLRRLKTEVEKQMP 689
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD1L_HUMAN (Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens GN=CHD1L PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.036e-42 Identity = 84/197 (42.64%), Postives = 130/197 (65.99%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT QTI+L YL GP +++ P S L NW E++RF P L V + G+ EER ++++L +F V +T++E+ +K+ S L+ F W +++DEAHR+KN++SLL KT+ ++ + LL+TGTP+QN+L EL+SLL+F+ P++FS E D + + E +LHK+L+PFLLRR+K++V LP Sbjct: 75 LGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKAEVATELP 271
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_USTMA (Putative DNA helicase INO80 OS=Ustilago maydis GN=INO80 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 5.179e-42 Identity = 85/210 (40.48%), Postives = 135/210 (64.29%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF--QISGEXDQ-----QEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+ISL+ YL E I GP +V+AP STL NW EI +F P L+A+ + GN ++R +R+ + F V VTS+++ + ++ +R W+Y+I+DEA IK+ +S+ KT+ +N RLL+TGTP+QN++ ELW+LL+F++P +F S + F EWF I +Q + +++LH +L+PF+LRR+K +V+ L Sbjct: 1027 LGKTVQSISLMAYLAEVHDIWGPFLVIAPASTLHNWQQEISKFVPTLKALPYWGNVKDRAVLRKFWNRKQISYNRDAPFHVLVTSYQLVVSDEKYFQRVKWQYMILDEAQAIKSSSSIRWKTLLGFNCRNRLLLTGTPVQNSMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAEQKGTLNEHQLRRLHMILKPFMLRRIKKNVQNEL 1236
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SWR1_CANAL (Helicase SWR1 OS=Candida albicans GN=SWR1 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 8.834e-42 Identity = 91/231 (39.39%), Postives = 133/231 (57.58%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFL---------LPEIFSSAETFDEWF---------QISG----------------EXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTISLL YL GPH+++ P S + NW E ++F P + + + G+P++R R+ F VC+TS+++ ++++ + +R W Y+I+DEAH IKN S + + +NT RLL+TGTPLQNNL ELWSLL FL +PE F++ + F +WF Q S + + + V +LH+VLRP+LLRRLK DVEK +P Sbjct: 852 LGKTIQTISLLAYLACEHHKWGPHLIIVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRKGWNKPDAFHVCITSYQLVVQDQQSFKRRRWTYMILDEAHNIKNFRSTRWRALLNFNTENRLLLTGTPLQNNLMELWSLLYFLMPSSKVNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQKMDEETRNTVARLHQVLRPYLLRRLKKDVEKQMP 1082
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_KLULA (Putative DNA helicase INO80 OS=Kluyveromyces lactis GN=INO80 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.154e-41 Identity = 88/210 (41.90%), Postives = 134/210 (63.81%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE----NLLVAGK---FDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXD-------QQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS+L +L + I GP +VV P STL NW+NEI RF P + + + GN +R+ +R+ L G+ F V VTS++M + + S L++ W+Y+I+DEA IK+ S KT+ ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F +WF E QE +++LH VL+PF+LRR+K +V+ L Sbjct: 775 LGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSEL 984 The following BLAST results are available for this feature:
BLAST of DN617437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617437 ID=DN617437; Name=DN617437; organism=Citrus sinensis; type=EST; length=595bpback to top |