DN617437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_CANGA (Putative DNA helicase INO80 OS=Candida glabrata GN=INO80 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.507e-41 Identity = 85/210 (40.48%), Postives = 135/210 (64.29%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-----NLLVAGK--FDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXD-------QQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS+L +L E I GP +VV P STL NW+NEI +F P + + + G+ +R+ +R+ NL + K F V +TS++M + + S L++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F+EWF E Q+ +++LH +L+PF+LRR+K +V+ L Sbjct: 751 LGKTVQSISVLAHLAEHHNIWGPFLVVTPASTLHNWVNEISKFVPQFKILPYWGSANDRKVLRKFWDRKNLRYSEKSPFHVMITSYQMVVADASYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFNEWFSRDIESHAEGNSSLNQQQLRRLHMILKPFMLRRIKKNVQSEL 960
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_ARATH (DNA helicase INO80 complex homolog 1 OS=Arabidopsis thaliana GN=INO80 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 1.507e-41 Identity = 81/205 (39.51%), Postives = 130/205 (63.41%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVA------GKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQIS-------GEXDQQEVVQQLHKVLRPFLLRRLKSDV 576 LGKT+Q ++ L +L E + I GP +VVAP S L NW +EI RFCP L+ + + G +ER +R+N+ F + +TS+++ + ++ RR W+Y+++DEA IK+ +S+ KT+ +N RLL+TGTP+QNN+ ELW+LL+F++P +F + + F+EWF G + + +LH +L+PF+LRR+K DV Sbjct: 615 LGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 819
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD1_BOMMO (Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.968e-41 Identity = 86/202 (42.57%), Postives = 132/202 (65.35%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-----NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTI L YL + + + GP + V P ST+ W E +++ P + V ++G+ R IR+ + KF+ +T++E+ +K++ LR FSW +++DEAHR+KN++SLL K ++ ++TN+RLL+TGTPLQN+L ELW+LL+F++P F S E F++ E + ++LHK L PF+LRR K DVEK LP Sbjct: 234 LGKTIQTICFLYYLFKSQHLYGPFLCVVPLSTMTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEWSFSSSKRLKFNAILTTYEILLKDRQFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFIMPYKFESWEDFEK----DHEDAATKGYEKLHKQLEPFILRRQKKDVEKSLP 431
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_MAGGR (Putative DNA helicase INO80 OS=Magnaporthe grisea GN=INO80 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.384e-41 Identity = 84/210 (40.00%), Postives = 131/210 (62.38%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +VVAP STL NW EI+RF P L+ V + G+ +R+ +R+ +F V +TS++M + + + ++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S E F +WF E Q + +++LH +L+PF+LRR+K V+K L Sbjct: 1107 LGKTIQSISVMAYLAEHHDIWGPFLVVAPASTLHNWEQEIKRFVPDLKIVPYWGSASDRKILRKFWDRKHSTYKRDAQFHVAITSYQMVVSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKCLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHEEFSDWFSKDIESHAQSNSKLNEDQLKRLHMILKPFMLRRVKKHVQKEL 1316
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: YFK8_YEAST (Uncharacterized ATP-dependent helicase YFR038W OS=Saccharomyces cerevisiae GN=YFR038W PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 7.479e-41 Identity = 86/218 (39.45%), Postives = 131/218 (60.09%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN---PEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF-----------------QISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPP 594 LGKT+Q+I+LL +++E GP +V AP STL NWMNE +F P L +K+ G E ++ G + +TS+E+ +++ + +W+++I+DE HR+KN N L K ++ NT+ RLL+TGTPLQNNL ELWSLLNF++P+IF+ E F++WF ++ + Q+ ++ LH +L+PFLLRRLK V + P Sbjct: 251 LGKTVQSIALLAFIYEM-DTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILP 467
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SWR1_CRYNE (Helicase SWR1 OS=Cryptococcus neoformans GN=SWR1 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 9.767e-41 Identity = 89/217 (41.01%), Postives = 132/217 (60.83%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLP----------EIFSSAETFDEWF--------QISGEXDQQ--EVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTI+LLG+L +G+ G H+++ P S + NW E ++F P ++ + + GN +ER+ R + VC+TS+++ + ++ RR +W Y+I+DEAH IKN S +T+ + RLL+TGTPLQNNL ELWSLL FL+P F++ + F EWF + D++ E V +LH +LRPF+LRRLKS+VE LP Sbjct: 422 LGKTIQTIALLGHLACDKGVWGQHLIIVPTSVILNWEMEFKKFLPGMKVLTYYGNQKERKEKRVGWHTENTWQVCITSYQIVLADQHIFRRKNWCYMILDEAHNIKNFRSQRWQTLLGFKAQRRLLLTGTPLQNNLMELWSLLYFLMPGGIGADATAVVGFANHKEFMEWFSNPMDKAIETGDAMDEETLETVAKLHTLLRPFILRRLKSEVETQLP 638
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_YEAS7 (Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain YJM789) GN=INO80 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.666e-40 Identity = 84/210 (40.00%), Postives = 134/210 (63.81%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-----NLLVA--GKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXD-------QQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS+L +L E I GP +VV P STL NW+NEI +F P + + + GN +R+ +R+ NL + F V VTS++M + + + L++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QN++ ELW+LL+F++P +F S + F+EWF E Q+ +++LH +L+PF+LRR+K +V+ L Sbjct: 741 LGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYSKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSEL 950
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_SCLS1 (Putative DNA helicase INO80 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=INO80 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.842e-40 Identity = 83/210 (39.52%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E GI GP +VVAP STL NW EI +F P L+ + + G +R+ +R+ F V VTS+++ + + + ++ W+Y+I+DEA IK+ S K++ ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V+K L Sbjct: 870 LGKTVQSISVMAYLAEKHGIWGPFLVVAPASTLHNWQQEITKFVPRLKVLPYWGTAADRKVLRKFWDRKHITYTEDAPFHVLVTSYQLVVSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQKEL 1079
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD1L_BOVIN (Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus GN=CHD1L PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.842e-40 Identity = 80/197 (40.61%), Postives = 129/197 (65.48%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT QTI+L YL GP +++ P S L NW E+ RF P L V + G+ ++R ++++L +F V +T++E+ +K+ S L+ F W +++DEAHR+KN++SLL KT+ ++ + LL+TGTP+QN+L EL+SLL+F+ P++FS + D + + E +L+K+L+PFLLRR+K++V LP Sbjct: 77 LGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKAEVATELP 273
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_YEAST (Putative DNA helicase INO80 OS=Saccharomyces cerevisiae GN=INO80 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.712e-40 Identity = 84/210 (40.00%), Postives = 133/210 (63.33%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-----NLLVA--GKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXD-------QQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS+L +L E I GP +VV P STL NW+NEI +F P + + + GN +R+ +R+ NL F V VTS++M + + + L++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QN++ ELW+LL+F++P +F S + F+EWF E Q+ +++LH +L+PF+LRR+K +V+ L Sbjct: 735 LGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSEL 944 The following BLAST results are available for this feature:
BLAST of DN617437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617437 ID=DN617437; Name=DN617437; organism=Citrus sinensis; type=EST; length=595bpback to top |