DN617437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_VANPO (Putative DNA helicase INO80 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=INO80 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.712e-40 Identity = 83/210 (39.52%), Postives = 133/210 (63.33%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIR-----ENLLVA--GKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXD-------QQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS+L +L E I GP +VV P STL NW+NEI +F P + + + GN +R+ +R +NL F V +TS++M + + S L++ W+Y+I+DEA IK+ S + + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F++WF E Q+ +++LH +L+PF+LRR+K +V+ L Sbjct: 829 LGKTVQSISVLAHLAEKYNIWGPFLVVTPASTLHNWVNEISKFVPQFKILPYWGNSNDRKILRRFWDRKNLRYNKDSPFHVMITSYQMVVSDTSYLQKMKWQYMILDEAQAIKSSQSSRWRNLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFNDWFSKDIESHAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSEL 1038
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_GIBZE (Putative DNA helicase INO80 OS=Gibberella zeae GN=INO80 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.847e-40 Identity = 82/210 (39.05%), Postives = 128/210 (60.95%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +VVAP STL NW EI +F P + + + G +R+ +R+ F VCVTS+++ + + + ++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V+K L Sbjct: 1074 LGKTVQSISVMAYLAEKHDIWGPFLVVAPASTLHNWQQEIAKFVPEFKILPYWGGASDRKVLRKFWDRKHTTYRKDAPFHVCVTSYQLVVSDVAYFQKMRWQYMILDEAQAIKSSQSSRWKALLNFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQKEL 1283
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_PHANO (Putative DNA helicase INO80 OS=Phaeosphaeria nodorum GN=INO80 PE=3 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 6.331e-40 Identity = 81/210 (38.57%), Postives = 131/210 (62.38%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +V+AP STL NW EI +F P L + + G ++R+ +R+ F V V+S+++ +++ ++ W+Y+I+DEA IK+ NS K++ +++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V+K L Sbjct: 850 LGKTVQSISVMAYLAERYNIWGPFLVIAPASTLHNWQQEIAKFVPDLNVIPYWGTAKDRKVLRKLWDRKHVTYTRDSPFHVVVSSYQLVVQDAQYFQKMRWQYMILDEAQAIKSSNSSRWKSLLNFHSRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQKEL 1059
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_MOUSE (Putative DNA helicase INO80 complex homolog 1 OS=Mus musculus GN=Ino80 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 6.331e-40 Identity = 80/209 (38.28%), Postives = 129/209 (61.72%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIR----ENLLVA--GKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF--QISGEXDQQEVVQQ-----LHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+I+LL +L E I GP ++++P STL NW E RF P + + + GNP +R+ IR + L F V +TS+++ +++ +R W+Y+++DEA +K+ +S+ K + + RLL+TGTP+QN + ELW+LL+F++P +F S E F+EWF I + + + + LH +L+PF+LRR+K DVE L Sbjct: 549 LGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENEL 757
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_HUMAN (Putative DNA helicase INO80 complex homolog 1 OS=Homo sapiens GN=INO80 PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 6.331e-40 Identity = 80/209 (38.28%), Postives = 129/209 (61.72%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIR----ENLLVA--GKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF--QISGEXDQQEVVQQ-----LHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+I+LL +L E I GP ++++P STL NW E RF P + + + GNP +R+ IR + L F V +TS+++ +++ +R W+Y+++DEA +K+ +S+ K + + RLL+TGTP+QN + ELW+LL+F++P +F S E F+EWF I + + + + LH +L+PF+LRR+K DVE L Sbjct: 547 LGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENEL 755
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_EMENI (Putative DNA helicase ino80 OS=Emericella nidulans GN=ino80 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.331e-40 Identity = 80/210 (38.10%), Postives = 131/210 (62.38%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +V+AP STL NW EI +F P ++ + + GN ++R+ +R+ +F V VTS+++ + + ++ W+Y+I+DEA IK+ S K++ ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V++ L Sbjct: 827 LGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKESEFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQEL 1036
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_DEBHA (Putative DNA helicase INO80 OS=Debaryomyces hansenii GN=INO80 PE=3 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 8.269e-40 Identity = 83/211 (39.34%), Postives = 135/211 (63.98%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE----NLLVAGK---FDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF--------QISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS+L YL E I GP +VV P STL NW EI RF P + + + GN ++R+ +R+ GK F V VTS+++ + + + ++ W+Y+I+DEA IK+ S K++ ++ RLL+TGTP+QN++ ELW+LL+F++P +F S + F +WF Q + E ++Q+ +++LH +L+PF+LRR+K +V+ L Sbjct: 596 LGKTVQSISVLAYLAETHNIWGPFLVVTPASTLHNWQQEISRFVPEFKVIPYWGNAKDRKVLRKFWDRKNFRYGKDAPFHVLVTSYQLVVADAAYFQKMKWQYMILDEAQAIKSSQSSRWKSLLSFSCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAQSNTELNEQQ-LRRLHVILKPFMLRRIKKNVQSEL 805
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD1L_MOUSE (Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus GN=Chd1l PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.410e-39 Identity = 82/197 (41.62%), Postives = 126/197 (63.96%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT QTI+LL YL GP +V+ P S L NW E+ RF P L V + G+ EER ++++L F V +T++E+ +K+ S L+ FSW + +DEAHR+KN++SLL +T+ ++ +RLL+TGTP+QN+L EL+SLL + P++F + D + + + +LH++L+PFLLRR+K+ V LP Sbjct: 69 LGKTCQTIALLIYLVGRLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSASELHRLLQPFLLRRVKAQVATELP 265
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_COCIM (Putative DNA helicase INO80 OS=Coccidioides immitis GN=INO80 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.842e-39 Identity = 82/210 (39.05%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +VVAP STL NW EI +F P L+ + + G+ ++R+ +R+ +F V VTS+++ + + ++ W+Y+I+DEA IK+ S K++ + RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V+K L Sbjct: 825 LGKTVQSISVMAYLAEVHDIWGPFLVVAPSSTLHNWQQEIVKFVPDLKVLPYWGSAKDRKVLRKFWDRRNITYRKQSEFHVLVTSYQLVVGDAQYFQKIKWQYMILDEAQAIKSSQSSRWKSLLGMHCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRIKKHVQKEL 1034
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_ASHGO (Putative DNA helicase INO80 OS=Ashbya gossypii GN=INO80 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.842e-39 Identity = 81/211 (38.39%), Postives = 135/211 (63.98%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF--------QISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS+L +L E I GP +VV P STL NW+NEI++F P + + + GN +R+ +R F V +TS++M + + + L++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QN++ ELW+LL+F++P +F S + F++WF Q + + +QQ+ +++LH +L+PF+LRR+K +V+ L Sbjct: 684 LGKTVQSISVLAHLAERYNIWGPFIVVTPASTLHNWVNEIQKFVPDFKILPYWGNGNDRKILRRFWDRKHLRYSKDAPFHVMITSYQMIVSDAAYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNDWFSKDIESHAQSNTQLNQQQ-LRRLHMILKPFMLRRIKKNVQSEL 893 The following BLAST results are available for this feature:
BLAST of DN617437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617437 ID=DN617437; Name=DN617437; organism=Citrus sinensis; type=EST; length=595bpback to top |