DN617437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_NEOFI (Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.406e-39 Identity = 79/210 (37.62%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +V+AP STL NW EI +F P ++ + + G+ ++R+ +R+ +F V VTS+++ + + ++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V++ L Sbjct: 862 LGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKVLRKFWDRKHITYTKESEFHVLVTSYQLVVLDSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQEL 1071
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_ASPFU (Putative DNA helicase ino80 OS=Aspergillus fumigatus GN=ino80 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.406e-39 Identity = 79/210 (37.62%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +V+AP STL NW EI +F P ++ + + G+ ++R+ +R+ +F V VTS+++ + + ++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V++ L Sbjct: 862 LGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKVLRKFWDRKHITYTKESEFHVLVTSYQLVVLDSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQEL 1071
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_ASPCL (Putative DNA helicase ino80 OS=Aspergillus clavatus GN=ino80 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.406e-39 Identity = 79/210 (37.62%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +V+AP STL NW EI +F P ++ + + G+ ++R+ +R+ +F V VTS+++ + + ++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V++ L Sbjct: 864 LGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKVLRKFWDRKHITYTKESEFHVLVTSYQLVVLDSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFSCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQEL 1073
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_ASPTN (Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ino80 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.142e-39 Identity = 79/210 (37.62%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +V+AP STL NW EI +F P ++ + + G+ ++R+ +R+ +F V VTS+++ + + ++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V++ L Sbjct: 847 LGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKILRKFWDRKHITYTKESEFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQQEL 1056
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_ASPOR (Putative DNA helicase ino80 OS=Aspergillus oryzae GN=ino80 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.142e-39 Identity = 79/210 (37.62%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +V+AP STL NW EI +F P ++ + + G+ ++R+ +R+ +F V VTS+++ + + ++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V++ L Sbjct: 662 LGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKILRKFWDRKHITYTKESEFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFSCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQQEL 871
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_ASPNC (Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ino80 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.142e-39 Identity = 79/210 (37.62%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +V+AP STL NW EI +F P ++ + + G+ ++R+ +R+ +F V VTS+++ + + ++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V++ L Sbjct: 852 LGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKILRKFWDRKHITYTKESEFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQEL 1061
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_SCHPO (Putative DNA helicase ino80 OS=Schizosaccharomyces pombe GN=ino80 PE=1 SV=4) HSP 1 Score: 160.229 bits (404), Expect = 7.000e-39 Identity = 81/210 (38.57%), Postives = 129/210 (61.43%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-----NLLVA--GKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +V+AP STL NW EI RF P L+ + + G+ ++R+ +R+ N+ F V VTS+++ + + + W+Y+I+DEA IK+ +S K++ + RLL+TGTP+QN + ELW+LL+F++P +F S F EWF E Q + +++LH +L+PF+LRR+K +V+ L Sbjct: 871 LGKTVQSISVMAYLAETHNIWGPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMILKPFMLRRVKKNVQSEL 1080
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_NEUCR (Putative DNA helicase ino-80 OS=Neurospora crassa GN=ino-80 PE=3 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 2.660e-38 Identity = 80/210 (38.10%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQ-------EVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS++ YL E I GP +VVAP STL NW EI +F P + + + G +R+ +R+ F V +TS+++ + + + ++ W+Y+I+DEA IK+ S K + ++ RLL+TGTP+QNN+ ELW+LL+F++P +F S + F EWF E Q + +++LH +L+PF+LRR+K V+K L Sbjct: 1147 LGKTVQSISVMAYLAEKYDIWGPFLVVAPASTLHNWQQEITKFVPQFKVLPYWGTAGDRKVLRKFWDRKHTTYKKDAPFHVMITSYQLVVSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKCLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHVQKEL 1356
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: PKL_ARATH (CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana GN=PKL PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.926e-38 Identity = 89/221 (40.27%), Postives = 128/221 (57.92%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGK-----------------------FDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPP 594 LGKT+Q+I+LL L E I PH+V+AP STL NW E + P + V + G + R IRE+ K FDV +TS+EM + + L+ W +I+DE HR+KN++S L ++ Y++N+R+L+TGTPLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LHK+L P LLRR+K DV K +PP Sbjct: 302 LGKTIQSIALLASLFEENLI--PHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHKMLAPHLLRRVKKDVMKDMPP 517
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_DROME (Putative DNA helicase Ino80 OS=Drosophila melanogaster GN=Ino80 PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 5.926e-38 Identity = 78/209 (37.32%), Postives = 129/209 (61.72%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-----NLLVA-GKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXD-------QQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+I+ L ++ E G+ GP +V++P STL NW E+ RF P + V + G+P ER+ +R+ +L F V +TS+++ + + R W+Y+++DEA IK+ S K + ++ RLL++GTP+QN++ ELW+LL+F++P +F S + F+EWF E ++ + +LH +L+PF+LRR+K DVE L Sbjct: 564 LGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDASFHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENEL 772 The following BLAST results are available for this feature:
BLAST of DN617437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617437 ID=DN617437; Name=DN617437; organism=Citrus sinensis; type=EST; length=595bpback to top |