DN617437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_CANAL (Putative DNA helicase INO80 OS=Candida albicans GN=INO80 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 7.739e-38 Identity = 80/211 (37.91%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF--------QISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS+L YL E + GP +VV P STL NW EI +F P + + + GN ++R+ +R+ F V VTS+++ + + + ++ W+Y+I+DEA IK+ +S K++ RLL+TGTP+QN++ ELW+LL+F++P IF S + F +WF Q + D+Q+ +++LH +L+PF+LRR+K +V+ L Sbjct: 701 LGKTVQSISVLAYLAETYNMWGPFLVVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDSPFHVLVTSYQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPIQNSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQ-LRRLHMILKPFMLRRIKKNVQSEL 910
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD1_YEAST (Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae GN=CHD1 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 7.739e-38 Identity = 82/206 (39.81%), Postives = 130/206 (63.11%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-----NLLVAGK----FDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QT++ + +L R GPH++V P ST+ W++ ++ P L + ++GN + R IRE N GK F+V +T++E +K+++ L W+++ +DEAHR+KN S L +++ + R+LITGTPLQNN+ EL +L+NFL+P F+ + D F+ E +Q+E + LH+ ++PF+LRRLK DVEK LP Sbjct: 405 LGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEID--FENQDE-EQEEYIHDLHRRIQPFILRRLKKDVEKSLP 607
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD1_DROME (Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila melanogaster GN=Chd1 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.320e-37 Identity = 80/202 (39.60%), Postives = 127/202 (62.87%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-----NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QTI L L + + GP + V P ST+ W E + P + V +LG+ + R I++ KF+ +T++E+ +K+K L W +++DEAHR+KN++SLL K+++ ++TN+RLLITGTPLQN+L ELW+LL+F++P+ F + E F++ + + +LH+ L P++LRR+K DVEK LP Sbjct: 557 LGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPDKFDTWEN----FEVQHGNAEDKGYTRLHQQLEPYILRRVKKDVEKSLP 754
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: SMRCD_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 OS=Homo sapiens GN=SMARCAD1 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.724e-37 Identity = 84/209 (40.19%), Postives = 130/209 (62.20%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGK-FDVCVTSFEMAIK---EKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAET-----FDEWFQISGEXD--QQEVVQQLHKVLRPFLLRRLKSDVEKGLPP 594 LGKT+Q I+ L YL++ G GPH++V P ST+ NW+ E+ +CP L+ + + G+ EER+ IR N+ + ++V VT++ AI ++S RR Y I DE H +KN S+ + + N N RLL+TGTP+QNNL EL SLLNF++P +FSS+ + F + + E ++E + ++++PF+LRR+K +V K LPP Sbjct: 526 LGKTIQAIAFLAYLYQ-EGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPP 733
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: INO80_LODEL (Putative DNA helicase ino80 OS=Lodderomyces elongisporus GN=INO80 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37 Identity = 79/211 (37.44%), Postives = 131/211 (62.09%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-------NLLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF--------QISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGL 588 LGKT+Q+IS+L YL E I GP +VV P STL NW EI +F P + + + G+ ++R+ +R+ F V VTS+++ + + + ++ W+Y+I+DEA IK+ S K++ + RLL+TGTP+QN++ ELW+LL+F++P +F S + F +WF Q + D+Q+ +++LH +L+PF+LRR+K +V+ L Sbjct: 766 LGKTVQSISVLSYLAETHNIWGPFLVVTPASTLHNWQQEISKFVPNFKVLPYWGHAKDRKVLRKFWDRKSLRYDKDAPFHVLVTSYQLIVSDIAYFQKMKWQYMILDEAQAIKSSQSSRWKSLLSLSCRNRLLLTGTPIQNSMQELWALLHFIMPTLFDSHDEFSDWFSKDIESHAQSNTGLDEQQ-LRRLHMILKPFMLRRIKKNVQSEL 975
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: HRP1_SCHPO (Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe GN=hrp1 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.941e-37 Identity = 86/205 (41.95%), Postives = 121/205 (59.02%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAG------KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAE--TFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+QT+ L YL GP ++V P ST+ W + + P L ++ + GN E R +IRE KF++ +T++E +K+K L W+Y+ IDEAHR+KN S L +T+ + T RLLITGTPLQNNL EL SL+NFL+P F + FD+ +Q+ ++ L + L+PF+LRRLK DVEK LP Sbjct: 419 LGKTVQTVCFLSYLVHSLKQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVNFLMPGKFYIRDELNFDQ-----PNAEQERDIRDLQERLQPFILRRLKKDVEKSLP 618
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD3_CAEEL (Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 6.552e-37 Identity = 86/216 (39.81%), Postives = 124/216 (57.41%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLL------VAG-------------KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 591 LGKT+Q+++ L L + GP ++ AP ST+ NW E +CP V ++G+ E R IRE+ V G KF V +TS+E +K+ L W +++DEAHR+KN S K +R YN YR+L+TGTPLQNNL EL+ LLNFL P+ F+ E+F F E +++ +++LH +L P +LRRLK+DV G+P Sbjct: 645 LGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEF---SEISKEDQIEKLHNLLGPHMLRRLKADVLTGMP 857
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD7_MOUSE (Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.252e-36 Identity = 86/209 (41.15%), Postives = 128/209 (61.24%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIR---------ENLLVAG--KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPP 594 LGKT+Q+I+ L ++ +GI GP +V+AP ST+ NW E R + L V + G+ RR I+ + ++ G KF +T+FEM + + LR WR ++IDEAHR+KN N L + +++ + +++L+TGTPLQN + EL+SLL+FL P F S TF + F G+ +E VQ+L +L+P +LRRLK DVEK L P Sbjct: 987 LGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF---GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 1190
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD7_HUMAN (Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7 PE=1 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 3.252e-36 Identity = 86/209 (41.15%), Postives = 128/209 (61.24%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIR---------ENLLVAG--KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPP 594 LGKT+Q+I+ L ++ +GI GP +V+AP ST+ NW E R + L V + G+ RR I+ + ++ G KF +T+FEM + + LR WR ++IDEAHR+KN N L + +++ + +++L+TGTPLQN + EL+SLL+FL P F S TF + F G+ +E VQ+L +L+P +LRRLK DVEK L P Sbjct: 997 LGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF---GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 1200
BLAST of DN617437 vs. ExPASy Swiss-Prot
Match: CHD7_CHICK (Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 86/209 (41.15%), Postives = 128/209 (61.24%), Query Frame = 1 Query: 1 LGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIR---------ENLLVAG--KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGEXDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPP 594 LGKT+Q+I+ L ++ +GI GP +V+AP ST+ NW E R + L V + G+ RR I+ + ++ G KF +T+FEM + + LR WR ++IDEAHR+KN N L + +++ + +++L+TGTPLQN + EL+SLL+FL P F S TF + F G+ +E VQ+L +L+P +LRRLK DVEK L P Sbjct: 998 LGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF---GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP 1201 The following BLAST results are available for this feature:
BLAST of DN617437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617437 ID=DN617437; Name=DN617437; organism=Citrus sinensis; type=EST; length=595bpback to top |