DN617434

Overview
NameDN617434
Unique NameDN617434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617434 vs. ExPASy Swiss-Prot
Match: MTNC_SHEHH (Enolase-phosphatase E1 OS=Shewanella halifaxensis (strain HAW-EB4) GN=mtnC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.601e-12
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = -3
Query:  343 IFGNSNYGDLRKYLSGFFDTAVGNKRETRSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 618
            +F +S+ GDL    +G FDT  GNKR  ++Y  I N++ +  P +ILFV+DV +E  AA  AGL VV  +R  +        FKTI+SFAE+
Sbjct:  136 LFSHSDAGDLNDKFNGHFDTRTGNKRFKQAYCNIVNTISL-SPKQILFVSDVLEELKAASEAGLNVVQMVRDDS---QRTGDFKTISSFAEL 223          
BLAST of DN617434 vs. ExPASy Swiss-Prot
Match: ENOPH_MOUSE (Enolase-phosphatase E1 OS=Mus musculus GN=Enoph1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.601e-12
Identity = 37/94 (39.36%), Postives = 61/94 (64.89%), Query Frame = -3
Query:  343 IFGNSNYGDLRKYLSGFFDTAVGNKRETRSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTINSFAEI 618
            +FG+S  GD+ + + G FDT +G+K ++ SY +I +S+G    + ILF+TDV  EA+AA+ A + V + +RPGN  L ++    +  I SF+E+
Sbjct:  160 LFGHSTEGDILELIDGHFDTKIGHKVDSESYRKIADSIGC-STNNILFLTDVTVEASAAEEADVHVAVVVRPGNAGLTDDEKTYYNLITSFSEL 252          
BLAST of DN617434 vs. ExPASy Swiss-Prot
Match: ENOPH_DANRE (Enolase-phosphatase E1 OS=Danio rerio GN=enoph1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.601e-12
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = -3
Query:  343 IFGNSNYGDLRKYLSGFFDTAVGNKRETRSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENH--GFKTINSFAEI 618
            +FG S  GD+     G FDT +G K E++SY  I   +G  +P EI+F+TDV +EA AA+ AG+ V + +RPGN  L E     ++ I SF ++
Sbjct:  163 LFGYSVQGDILDLFDGHFDTNIGAKVESKSYENIAERIGC-QPEEIMFLTDVTREAKAAEDAGVNVAVVVRPGNMELTEEERDHYRIITSFNQL 255          
BLAST of DN617434 vs. ExPASy Swiss-Prot
Match: MTNC_MARAV (Enolase-phosphatase E1 OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=mtnC PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.009e-12
Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = -3
Query:  391 IFGNSNYGDLRKYLSGFFDTAVGNKRETRSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP 618
            IFG+SN GD   + SG+FDTAVG K+E++SY  I   LGVD    +LF++DV +E  AA+ AGL+    +R G  P
Sbjct:  136 IFGHSNEGDFTVFFSGYFDTAVGGKKESQSYRNILAELGVD-AGTVLFLSDVEEELRAAEEAGLKTAWLVREGELP 210          
BLAST of DN617434 vs. ExPASy Swiss-Prot
Match: MTNC_AZOVD (Enolase-phosphatase E1 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=mtnC PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.339e-11
Identity = 43/92 (46.74%), Postives = 53/92 (57.61%), Query Frame = -3
Query:  343 IFGNSNYGDLRKYLSGFFDTAVGNKRETRSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 618
            IFG S  GDL    SG+FDT  G KRE  SYV I  ++G   P+EILF++DV QE  AA+AAG+      R G     E  G  T++SF  I
Sbjct:  136 IFGCSEAGDLSPLFSGYFDTTSGPKREAASYVRIAEAIG-RPPAEILFLSDVLQELDAARAAGMCTCGLAREGG----ELDGHPTVSSFTAI 222          
BLAST of DN617434 vs. ExPASy Swiss-Prot
Match: MTNC_SHESR (Enolase-phosphatase E1 OS=Shewanella sp. (strain MR-7) GN=mtnC PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = -3
Query:  343 IFGNSNYGDLRKYLSGFFDTAVGNKRETRSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 618
            +F +S+ GDL +  SG FDT  GNK + ++Y  I N++ +  P ++LFV+DV +E  AA+AAG+     +R           F+TINSF E+
Sbjct:  136 LFSHSDGGDLTEMFSGHFDTRTGNKLDKQAYANILNTISL-SPKQVLFVSDVVEELKAAEAAGMMTCQMVRDSK---QRTGDFRTINSFDEL 223          
BLAST of DN617434 vs. ExPASy Swiss-Prot
Match: MTNC_SHESM (Enolase-phosphatase E1 OS=Shewanella sp. (strain MR-4) GN=mtnC PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = -3
Query:  343 IFGNSNYGDLRKYLSGFFDTAVGNKRETRSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 618
            +F +S+ GDL +  SG FDT  GNK + ++Y  I N++ +  P ++LFV+DV +E  AA+AAG+     +R           F+TINSF E+
Sbjct:  136 LFSHSDGGDLTEMFSGHFDTRTGNKLDKQAYANILNTISL-SPKQVLFVSDVVEELKAAEAAGMMTCQMVRDSK---QRTGDFRTINSFDEL 223          
BLAST of DN617434 vs. ExPASy Swiss-Prot
Match: MTNC_SHEPA (Enolase-phosphatase E1 OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=mtnC PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.644e-11
Identity = 39/92 (42.39%), Postives = 54/92 (58.70%), Query Frame = -3
Query:  343 IFGNSNYGDLRKYLSGFFDTAVGNKRETRSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 618
            +F +S+ GDL    +G FDT  GNKR  ++Y  I N++ +  P +ILFV+DV +E  AA  AGL VV  +R  +        FKTI SF E+
Sbjct:  136 LFSHSDAGDLNDKFNGHFDTRTGNKRFKQAYSNIVNTISL-SPKQILFVSDVLEELKAANEAGLHVVQMVRDDS---QRTGDFKTIASFDEL 223          
The following BLAST results are available for this feature:
BLAST of DN617434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
MTNC_SHEHH4.601e-1243.48Enolase-phosphatase E1 OS=Shewanella halifaxensis ... [more]
ENOPH_MOUSE4.601e-1239.36Enolase-phosphatase E1 OS=Mus musculus GN=Enoph1 P... [more]
ENOPH_DANRE4.601e-1241.49Enolase-phosphatase E1 OS=Danio rerio GN=enoph1 PE... [more]
MTNC_MARAV6.009e-1248.68Enolase-phosphatase E1 OS=Marinobacter aquaeolei (... [more]
MTNC_AZOVD1.339e-1146.74Enolase-phosphatase E1 OS=Azotobacter vinelandii (... [more]
MTNC_SHESR6.644e-1139.13Enolase-phosphatase E1 OS=Shewanella sp. (strain M... [more]
MTNC_SHESM6.644e-1139.13Enolase-phosphatase E1 OS=Shewanella sp. (strain M... [more]
MTNC_SHEPA6.644e-1142.39Enolase-phosphatase E1 OS=Shewanella pealeana (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617434 ID=DN617434; Name=DN617434; organism=Citrus sinensis; type=EST; length=620bp
TTTCTGAAAAATGTTCGAATTCTAGAAAAGCAATTAATAGGATTCATATT
TCATGGGAGTAACACTTGCTAAAGTTTAAGAGAAATTCACACACTCAAGG
TATCAGCAAAAGATATTTCCACCCAATATGCACAAAACGGAATAGGATCC
TCTCCTGATATATGATCAGATCAGGAGAGGACCCTGATCCGCACAAAACA
TATTCGAGGAACCCTTGACTCTTTTAAAATATCTTATGAGACTAAAAGAG
AGAGTTCACAACAAGAGTAATCACATTATATCTTCTTATAGTTTAACTAC
ACATATCTCATTTGAAATGATTATGGAAGATTTCTGCTTTTAGATTTCCG
CGAAAGAATTGATTGTCTTGAAGCCATGGTTCTCTGGAAGAGGTCCATTT
CCTGGCCGGATAGAAATTACCACCTCCAAACCCGCAGCTTTTGCAGCTGT
AGCTTCTTGATATACATCTGTCACAAATAAGATCTCGGATGGCTTATCAA
CTCCCAATGAGTTTGTGATTTCGACATAACTGCGTGTTTCTCTTTTGTTC
CCCACTGCAGTGTCGAAAAAGCCAGATAAATATTTTCTTAAATCCCCATA
ATTTGAATTTCCAAAAATAA
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