DN617430

Overview
NameDN617430
Unique NameDN617430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617430 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.032e-19
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = -2
Query:  164 CNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPP-----HSPYFFLDEDVLPIGAALYTNLAETYLNEH 493
            C A +D  E++ PPYPATVND+ ++   + V +S+LG  NV  + + M  EDF FY Q IP     IG+ N+  G          HSP+F +DE+ LP+GAA +  +A  YLN++
Sbjct:  297 CTAAVDFMEDKLPPYPATVNDEEMYAHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFGIGVGNDGGGMAETTTKNQLHSPHFVVDEEALPVGAAFHAAVAIEYLNKN 411          
BLAST of DN617430 vs. ExPASy Swiss-Prot
Match: ILR1_ARATH (IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.298e-19
Identity = 42/114 (36.84%), Postives = 72/114 (63.16%), Query Frame = -2
Query:  158 HSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNEHQH 499
            + C A ++ +E++   +P   ND+ L+   ++V ++++G  N  +    M GEDF+F+ Q     +  +G++NE  G+  P HSPYFF+DE+ LP+GAAL+  +A +YL+EH H
Sbjct:  319 YRCKAEVNFEEKKPSLHPVMNNDEGLYEHGKKVAEAMIGKNNFHDFPVTMGGEDFSFFTQKTKAAIFVLGVKNETLGAGKPLHSPYFFVDEEALPVGAALHAAMAVSYLDEHGH 432          
BLAST of DN617430 vs. ExPASy Swiss-Prot
Match: ILL4_ORYSJ (IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sativa subsp. japonica GN=ILL4 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.809e-17
Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = -2
Query:  164 CNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGI--RNEEKGSI-----HPPHSPYFFLDEDVLPIGAALYTNLAETYLNEH 493
            C A +D  E++  PYPATVND+ ++   + V +S+LG  NV  +   M  EDF FY Q IP     IG+     + G +     +  HSP+F +DE+ LP+GAA +  +A  YLN++
Sbjct:  292 CTAAVDFMEDKLRPYPATVNDEGMYAHAKAVAESMLGEANVTVSPMCMGAEDFGFYAQRIPAAFFGIGVGSNGNDGGGMAETTKNQLHSPHFVVDEEALPVGAAFHAAVAIEYLNKN 408          
BLAST of DN617430 vs. ExPASy Swiss-Prot
Match: ILL9_ORYSJ (IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 8.174e-17
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = -2
Query:  164 CNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGS---IHPPHSPYFFLDEDVLPIGAALYTNLAETYLNEH 493
            C   +D  EE   PYPA VND+ ++       + LLG   V  A ++M  EDF FY   +P    +IG+ N    S    H  HSP+F +DE  LP+GAA++  +A  YL++H
Sbjct:  324 CGGGVDFMEESMRPYPAVVNDEGMYAHARASAERLLGAGGVRVAPQLMGAEDFGFYAARMPSAFFTIGVGNATTSSARAAHTTHSPHFVIDEAALPVGAAVHAAVAIDYLSKH 436          
BLAST of DN617430 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 4.056e-16
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = -2
Query:  167 HSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 499
            H CNA ++L      P P TVN+  L+   ++V + LLG +   EA  VM  EDF+++ + IPG    +G+++E  G     HSP + ++EDVLP GAA++ ++A  YL E
Sbjct:  316 HRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHASMAVQYLKE 425          
BLAST of DN617430 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.434e-15
Identity = 41/111 (36.94%), Postives = 67/111 (60.36%), Query Frame = -2
Query:  167 HSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 499
            H CNA ++L    + P P TVN+  L+   ++V + LLG +   EA   M  EDF+++ + IPG    +G+++E +G     HSP++ ++EDVLP GAA++  +A  YL +
Sbjct:  315 HRCNASVNLAPNGNQPMPPTVNNMDLYKKFKKVVRDLLGQEAFVEAVPEMGSEDFSYFAETIPGHFSLLGMQDETQG-YASSHSPHYRINEDVLPYGAAIHATMAVQYLKD 424          
BLAST of DN617430 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.959e-14
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = -2
Query:  161 HSCNAFIDLKEEEHPPYPATVNDDSLHLLVERVGKSLLGPKN--VGEAKKVMAGEDFAFYQQLIPGV-MLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNEHQ 499
            + C A +D      P  P T+N  +LH   + V    LG     +G  +  M  EDFA + + +P      +G+RNE +G +H  HSP+F +D+  LP GAAL+ +LA  YL+E +
Sbjct:  330 YRCAAAVDFHAGGRPLLPPTINSAALHAHFQAVAAETLGASAAVLGAMEPCMGSEDFAVFSEAVPASHFYFVGVRNEAEGLVHLAHSPHFRVDDAALPYGAALHASLAMRYLDERR 445          
BLAST of DN617430 vs. ExPASy Swiss-Prot
Match: CBPX1_SULSO (Thermostable carboxypeptidase 1 OS=Sulfolobus solfataricus GN=cpsA1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11
Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = -2
Query:  167 YPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 451
            YP TVN+  +    + V K L     V E + V+  EDF+ + Q  PG    +G RNE+KG I+P HS  F +DEDVL +GA  +  LA  + N+
Sbjct:  302 YPTTVNNPEV---TDEVMKILSSISTVVETEPVLGAEDFSRFLQKAPGTYFFLGTRNEKKGCIYPNHSSKFCVDEDVLKLGALAHALLAVKFSNK 393          
BLAST of DN617430 vs. ExPASy Swiss-Prot
Match: CBPX2_SULSO (Thermostable carboxypeptidase 2 OS=Sulfolobus solfataricus GN=cpsA2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.008e-11
Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = -2
Query:  167 YPATVNDDSLHLLVERVGKSLLGPKNVGEAKKVMAGEDFAFYQQLIPGVMLSIGIRNEEKGSIHPPHSPYFFLDEDVLPIGAALYTNLAETYLNE 451
            YP TVN+  +    + V K L     V E + V+  EDF+ + Q  PG+   +G RNE+KG I+P HS  F +DEDVL +GA  +  LA  + N+
Sbjct:  302 YPITVNNPEV---TDEVMKILSSISTVVETEPVLGAEDFSRFLQKAPGMYFFLGTRNEKKGCIYPNHSSKFCVDEDVLKLGALAHALLAIKFSNK 393          
The following BLAST results are available for this feature:
BLAST of DN617430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
ILL3_ORYSJ1.032e-1940.87IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]
ILR1_ARATH2.298e-1936.84IAA-amino acid hydrolase ILR1 OS=Arabidopsis thali... [more]
ILL4_ORYSJ2.809e-1738.46IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sati... [more]
ILL9_ORYSJ8.174e-1738.05IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sati... [more]
ILL2_ARATH4.056e-1638.74IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL1_ARATH3.434e-1536.94IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILL2_ORYSJ4.959e-1435.34IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
CBPX1_SULSO2.303e-1140.00Thermostable carboxypeptidase 1 OS=Sulfolobus solf... [more]
CBPX2_SULSO3.008e-1140.00Thermostable carboxypeptidase 2 OS=Sulfolobus solf... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01D05_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617430 ID=DN617430; Name=DN617430; organism=Citrus sinensis; type=EST; length=548bp
TTTTTTTTTTTTTTTTTCTCCAATACTCTGTGAACTTTGTTTTTGCGGGC
AAGTTAAAAATCTACGCCTCCATGCATTTACAATATTACAAAGTTAAGAA
TGATTTGAGAACAGGGATTAAAATTTGCCATTTCTTACAATTTTACTGTA
CATTGAAATGTTGGTGCTCATTCAGATATGTTTCTGCAAGATTAGTGTAT
AATGCCGCTCCAATTGGCAGGACATCCTCATCAAGAAAGAAGTATGGGGA
GTGCGGAGGGTGAATTGAACCCTTTTCCTCATTTCTAATTCCAATGCTAA
GCATGACTCCAGGGATCAGTTGCTGATAAAAGGCAAAGTCCTCCCCAGCC
ATAACCTTCTTGGCCTCACCTACATTCTTGGGACCAAGCAAAGATTTGCC
AACCCTCTCGACAAGCAGATGCAAGCTATCATCGTTCACAGTAGCAGGAT
ATGGTGGGTGCTCTTCCTCTTTCAGGTCAATAAATGCATTACAACTGTGT
ACAGCTGCCTGCTGCTTCACAACCTATCAAACTCCTTCAGCCTTTTTT
back to top