DN617426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617426 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 1.745e-63 Identity = 114/158 (72.15%), Postives = 129/158 (81.65%), Query Frame = 2 Query: 116 AVPDPELVVHEVHKSINAS--RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 583 AV +PE V V SI S RR LGY SC TGNPIDDCWRCD W+ R+ LA+CAIGFG+NA+GGRDGR YVV+DP D + VNPKPGTLR+AVIQ+EPLWI+F RDM I LKEELIMNSFKTIDGRG +VHIA G CITIQ+VTNIIIHG++IHDC Sbjct: 36 AVENPEEVAAMVDMSIRNSTARRRLGYFSCSTGNPIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDC 193
BLAST of DN617426 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 5.078e-63 Identity = 115/163 (70.55%), Postives = 135/163 (82.82%), Query Frame = 2 Query: 101 LISASAVPDPELVVHEVHKSINAS--RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 583 L+ S++ DPELVV +VH+SINAS RRNLGYLSCG+GNPID P K + CAIGFGKNA+GG++GRIYVVTD G+ D VNPKPGTLR+AVIQDEPLWIIF RDM I+LK+EL+MNS+KTIDGRGASVHI+GGPCITI + +NIIIHG+NIHDC Sbjct: 16 LLVISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDRLLAMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEPLWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDC 178
BLAST of DN617426 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 9.576e-62 Identity = 112/166 (67.47%), Postives = 128/166 (77.11%), Query Frame = 2 Query: 104 ISASAVPDPELVVHEVHKSINAS------RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 583 ++ AV DP+ V HEV I+ S RR LG+ SCG GN IDDCWRCD NW KNR+ LADC +GFG A GGR+G YVVTD D DVVNPKPGTLR+AVIQ EPLWIIF RDM I+LK+ELIMNSFKTID RGA+VHIA G CITIQ +TN+I+HGL+IHDC Sbjct: 63 LNEHAVTDPDKVAHEVSNLIHMSEQNITARRKLGFFSCGNGNLIDDCWRCDRNWNKNRKHLADCGMGFGSKAFGGRNGSYYVVTDHSDDDVVNPKPGTLRHAVIQVEPLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNVIVHGLHIHDC 228
BLAST of DN617426 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 4.163e-57 Identity = 103/163 (63.19%), Postives = 123/163 (75.46%), Query Frame = 2 Query: 122 PDPELVVHEVHKSINAS--RRNL-------GYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 583 PDPELV ++V +NAS RR G C TGNPIDDCW+CDPNW NRQ LADC IGFG+ A+GG+ G+ Y VTD D D VNPKPGTLRY VIQ+EPLWI+F +M I+LK+ELI NS+KT+DGRGA+VHI GG CIT+QYV+NIIIH ++IH C Sbjct: 36 PDPELVAYQVQWKVNASITRRQALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHC 198
BLAST of DN617426 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 5.823e-51 Identity = 97/170 (57.06%), Postives = 122/170 (71.76%), Query Frame = 2 Query: 122 PDPELVVHEVHKSINAS--RRNLGY-------------LSCGTGNPIDDCWRC-DPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 583 P P+ V V +S+N S RR L SC TGNPIDDCWRC D +W NRQRLADC+IGFG +GG++G+IYVVTD D + NP PGTLRY VIQ+EPLWI+F+ +M IRLK+ELI+NS+KT+DGRG++VHI G C+T+QYV +IIIH L+I+DC Sbjct: 35 PSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDC 204
BLAST of DN617426 vs. ExPASy Swiss-Prot
Match: PEL2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.586e-48 Identity = 89/125 (71.20%), Postives = 105/125 (84.00%), Query Frame = 2 Query: 209 NPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 583 NPID CWR +P W NR+ LADCA+GFGK+AVGG+ G IYVVT+P D D NP+PGTLRYAVIQ +PLWI FARDM I L+ ELIMNS+KTIDGRGA V IA GPCITIQ+V+++IIHG++IHDC Sbjct: 37 NPIDSCWRRNPYWASNRRALADCAVGFGKSAVGGKYGSIYVVTNPSD-DPENPRPGTLRYAVIQSKPLWITFARDMVIVLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDC 160
BLAST of DN617426 vs. ExPASy Swiss-Prot
Match: PEL59_SOLLC (Probable pectate lyase P59 OS=Solanum lycopersicum GN=LAT59 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.906e-47 Identity = 90/143 (62.94%), Postives = 106/143 (74.13%), Query Frame = 2 Query: 164 NASRRNLGYLS----CGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 580 N++RR LG C NPID CWRCDPNW NR++LADCA+GFG A+GG+DG YVVTD D D +PKPGTLR+AVIQ EPLWIIF R M IRL +E+IM S KTID RG +VHI G IT+QY+ N+IIHGL+IHD Sbjct: 81 NSTRRGLGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLADCAMGFGSKAIGGKDGEFYVVTDNSD-DYNDPKPGTLRHAVIQKEPLWIIFKRGMNIRLHQEMIMQSDKTIDARGVNVHITKGAGITLQYIKNVIIHGLHIHD 222
BLAST of DN617426 vs. ExPASy Swiss-Prot
Match: PEL21_ARATH (Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 6.662e-47 Identity = 87/158 (55.06%), Postives = 112/158 (70.89%), Query Frame = 2 Query: 110 ASAVPDPELVVHEVHKSINASRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 583 A A+P P +V S + + GNPID+CWRCD NW+ NR+ LADCA+GFG++++GGR G Y VTD GD + +NP PGTLRYA QD+PLWIIF RDM I+LK++L + S+KTIDGRG +V IA GPC+T+ V+NIII+ L IHDC Sbjct: 19 AFAIPKPPIVRR---LSTTVTSNSTASSCSANGNPIDECWRCDENWKDNRKNLADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQLKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDC 173
BLAST of DN617426 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 8.144e-45 Identity = 84/128 (65.62%), Postives = 98/128 (76.56%), Query Frame = 2 Query: 197 CGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 580 C N ID CWRCDPNW +NRQ++ADCA+GFG NA+GG+ GRIYVVTD D DVV+PKPGTLRY VIQ EPLWIIF ++M I+L ELI+ S KTIDGRG +VHI G I IQ +NIII L IH+ Sbjct: 42 CRAENAIDKCWRCDPNWAENRQKMADCALGFGSNAIGGKLGRIYVVTDNSDDDVVDPKPGTLRYGVIQKEPLWIIFGKNMKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQSASNIIISNLRIHN 169
BLAST of DN617426 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.370e-44 Identity = 88/162 (54.32%), Postives = 110/162 (67.90%), Query Frame = 2 Query: 122 PDPELVVHEVHKSI------NASRRNLGYLSCG---TGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYVVTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHD 580 P PE V + +K++ N++RRNL G NPID CWRC NW NR+ L C GFG+ GG G IYVVTDP D + +PK GTLR+ VIQD PLWIIF + M IRLK+ELI+N+ KTIDGRGA+V IAGG +T+Q+V N+IIHG++IHD Sbjct: 48 PHPEEVTNHFNKAVHSSFEGNSTRRNLRTNKLGQCLATNPIDRCWRCKKNWSANRKDLVKCVKGFGRKTTGGAAGEIYVVTDPSDDSLTDPKFGTLRWGVIQDRPLWIIFGKSMVIRLKQELIINNDKTIDGRGANVQIAGGAQLTVQFVHNVIIHGIHIHD 209 The following BLAST results are available for this feature:
BLAST of DN617426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617426 ID=DN617426; Name=DN617426; organism=Citrus sinensis; type=EST; length=585bpback to top |