DN617423

Overview
NameDN617423
Unique NameDN617423
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9466 contig Csv1_Contig9466:299..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617423 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.325e-21
Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = -1
Query:  221 RHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 526
            R+YF++T GLI+VVDS DR R+ + + EL  +L E+ L  A LL+FANKQDLP A++   I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:   78 RNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 179          
BLAST of DN617423 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.325e-21
Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = -1
Query:  221 RHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 526
            R Y+ NT  +I+VVDS DRDR+  ++ EL  ML E+ELR A+L+VFANKQD+  AM ++E+ + LGL +L+ R W I  T AT G GL E ++WL   + ++
Sbjct:   79 RCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of DN617423 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5)

HSP 1 Score: 102.449 bits (254), Expect = 1.325e-21
Identity = 50/102 (49.02%), Postives = 69/102 (67.65%), Query Frame = -1
Query:  221 RHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 526
            R Y+ NT  +I+VVDS DRDR+  ++DEL  ML E+EL  A+L+V ANKQD+   M  AE+   LGL +L+ R + I  T AT GEGL + +DWLSN + ++
Sbjct:   78 RCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179          
BLAST of DN617423 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.260e-21
Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = -1
Query:  230 YFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 520
            Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   80 YYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of DN617423 vs. ExPASy Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.260e-21
Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = -1
Query:  230 YFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 520
            Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   80 YYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of DN617423 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.260e-21
Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = -1
Query:  230 YFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 520
            Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   80 YYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of DN617423 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.260e-21
Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = -1
Query:  230 YFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 520
            Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   80 YYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of DN617423 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.260e-21
Identity = 49/102 (48.04%), Postives = 69/102 (67.65%), Query Frame = -1
Query:  221 RHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 526
            R Y+ NT  +I+VVDS DRDR+  ++ EL  ML E+ELR A+L+VFANKQD+  AM  +E+ + LGL +L+ R W I  T AT G GL E ++WL   + ++
Sbjct:   79 RCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of DN617423 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.952e-21
Identity = 49/102 (48.04%), Postives = 69/102 (67.65%), Query Frame = -1
Query:  221 RHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 526
            R Y+ NT  +I+VVDS DRDR+  ++ EL  ML E+ELR A+L+VFANKQD+  AM  +E+ + LGL +L+ R W I  T AT G GL E ++WL   + ++
Sbjct:   79 RCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of DN617423 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.952e-21
Identity = 49/102 (48.04%), Postives = 69/102 (67.65%), Query Frame = -1
Query:  221 RHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 526
            R Y+ NT  +I+VVDS DRDR+  ++ EL  ML E+ELR A+L+VFANKQD+  AM  +E+ + LGL +L+ R W I  T AT G GL E ++WL   + ++
Sbjct:   79 RCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
The following BLAST results are available for this feature:
BLAST of DN617423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
ARL2_MOUSE1.325e-2148.04ADP-ribosylation factor-like protein 2 OS=Mus musc... [more]
ARL1_HUMAN1.325e-2148.04ADP-ribosylation factor-like protein 1 OS=Homo sap... [more]
ARL1_DROME1.325e-2149.02ADP-ribosylation factor-like protein 1 OS=Drosophi... [more]
ARL5A_RAT2.260e-2147.42ADP-ribosylation factor-like protein 5A OS=Rattus ... [more]
ARL5A_MOUSE2.260e-2147.42ADP-ribosylation factor-like protein 5A OS=Mus mus... [more]
ARL5A_HUMAN2.260e-2147.42ADP-ribosylation factor-like protein 5A OS=Homo sa... [more]
ARL5A_BOVIN2.260e-2147.42ADP-ribosylation factor-like protein 5A OS=Bos tau... [more]
ARL1_BOVIN2.260e-2148.04ADP-ribosylation factor-like protein 1 OS=Bos taur... [more]
ARL1_RAT2.952e-2148.04ADP-ribosylation factor-like protein 1 OS=Rattus n... [more]
ARL1_MOUSE2.952e-2148.04ADP-ribosylation factor-like protein 1 OS=Mus musc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D01_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617423 ID=DN617423; Name=DN617423; organism=Citrus sinensis; type=EST; length=526bp
AATTCTGGAATAATCGAGGGTAATTTAAACTCTACAATGACAATGCAGAA
AACTTTATAGTATGGTGCCAATCAAATATCTAACACAAACAAATACATTC
TACTGAACGTAGGTAGTAAAGCCCAAAAAGAATCCCCGACAAAATAAACA
AAAGCATAGTAACATCATTCACATAGATGCTGCCGCAAAGAGTCGCTCAG
ACTTGACCAATCACTTAAGCCTTGTTAGCGATGTTGTTGGAGAGCCAGTC
CAGACCCTCATAGAGTCCTTCCCCAGATGTTGCACATGTGCTCTGGATGT
ACCAGTGGCGTTGGCGAAGTGAGTGAAGACCAAGCTTATCAGTGATCTCT
GCAGCATTCATGGCATTTGGAAGATCTTGCTTGTTGGCAAAAACAAGCAG
CACAGCATCCCTCAACTCATCCTCATTCAGCATCCGGTGCAGTTCATCTC
TAGCTTCAACCACACGGTCACGATCATTGCTATCAACCACAAAGATAAGT
CCTTGAGTGTTTTGGAAGTAATGTCT
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