DN617410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15 Identity = 42/131 (32.06%), Postives = 66/131 (50.38%), Query Frame = 3 Query: 81 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR 473 DL ++P A SAG V + +++ W +I+GP D+ Y GG F + FP++YP PP V FTT+I+HPN+ G +C+ IL ++W P T+ N + P E A+ ++ Sbjct: 13 DLGRDPPASCSAGPVGD-DLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDIL-------------KDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYK 129
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.450e-14 Identity = 40/114 (35.09%), Postives = 56/114 (49.12%), Query Frame = 3 Query: 120 LVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNV-YPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEA 458 + D+TNIF+W+ I GP +T YEGG F S P YP PP V+F T+I+HPNV + G +C+ IL W P T++ P +SP N ++ Sbjct: 28 ICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDS 128
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.894e-14 Identity = 40/123 (32.52%), Postives = 60/123 (48.78%), Query Frame = 3 Query: 135 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKV 503 N++ W+ I G T +EGG + IM F +YP+ PP +F + +HPNVYP G VC+SIL+ D W P T++ PN +SPA + ++++ KKV Sbjct: 37 NLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEAD-----------WKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKV 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.894e-14 Identity = 41/138 (29.71%), Postives = 68/138 (49.28%), Query Frame = 3 Query: 81 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFK 494 DL ++P SAG V + +++ W +I+GP D+ Y GG F + FP++YP PP + FTT+I+HPN+ +G +C+ IL ++W P T+ N + P E A ++ R ++ Sbjct: 13 DLERDPPTSCSAGPVGD-DLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDIL-------------KDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYE 136
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.473e-14 Identity = 43/140 (30.71%), Postives = 69/140 (49.29%), Query Frame = 3 Query: 81 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNV-YPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKK 497 D+ K P + SA LVD+ N+ +W T+ GP + +E G F+ + P++YP PPT+KFTT+I+HPN+ DG +C + W P + PN ++P E A++++ R+ F K Sbjct: 13 DMLKTPPSWCSAHLVDD-NLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVF--------------STWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNK 137
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.510e-14 Identity = 42/126 (33.33%), Postives = 62/126 (49.21%), Query Frame = 3 Query: 126 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKV 503 +E NIF W TI G DT++EG + +SF ++YP PP VKF T +HPNV G +C+ IL ++W + V PN SP N +AA+ W +++++K V Sbjct: 60 EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDIL-------------QDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW-SNQEEYRKMV 171
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.196e-14 Identity = 42/123 (34.15%), Postives = 57/123 (46.34%), Query Frame = 3 Query: 135 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKV 503 N+ I G T +EGG F M F +YP+SPP KF ++HPNVYP G VC+SIL D W P T++ PN + PA EA + R +++K+V Sbjct: 37 NLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRV 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.398e-14 Identity = 40/138 (28.99%), Postives = 66/138 (47.83%), Query Frame = 3 Query: 81 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFK 494 +L ++P SAG E ++F W TI+GP ++ Y GG F + FP +YP PP V F T+++HPN+ +G +C+ IL ++W P T+ PN + P E A ++ + ++ Sbjct: 12 ELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDIL-------------KDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYE 135
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.227e-13 Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 3 Query: 126 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRD 476 + N+F+W TI G T+YE + + FPS YP + PTVKF T +HPNV G +C+ IL E+W ++ V PN +SP N AA+ W++ Sbjct: 55 ESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDIL-------------KEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKN 158
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.094e-13 Identity = 41/130 (31.54%), Postives = 60/130 (46.15%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR 473 L PV G A DE+N + V I GP D+ +EGG F + P YP + P V+F T+I+HPNV GR+C+ IL ++W P + PN + P + A++W+ Sbjct: 15 LLAEPVPGIKAE-PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130 The following BLAST results are available for this feature:
BLAST of DN617410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617410 ID=DN617410; Name=DN617410; organism=Citrus sinensis; type=EST; length=574bpback to top |