DN617410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.094e-13 Identity = 39/118 (33.05%), Postives = 58/118 (49.15%), Query Frame = 3 Query: 126 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDR 479 + N+F+W TI G T+YE + + FPS YP + PTVKF T +HPNV G +C+ IL ++W ++ V PN+ESP N AA+ W+++ Sbjct: 55 ESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDIL-------------KDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQ 159
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.094e-13 Identity = 38/120 (31.67%), Postives = 56/120 (46.67%), Query Frame = 3 Query: 144 EWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKV 503 +W I G T + GG + + +P+ YP+ PP VKF +HPNVYP G +C+SIL+ D W P T++ PN SPA A + + + ++ KKV Sbjct: 40 KWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQD-----------WRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKV 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 38/117 (32.48%), Postives = 56/117 (47.86%), Query Frame = 3 Query: 126 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRD 476 + N+F+W TI G T+YE + + FPS YP + PTVKF T +HPNV G +C+ IL ++W ++ V PN +SP N AA+ W++ Sbjct: 55 ESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDIL-------------KDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKN 158
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 38/117 (32.48%), Postives = 56/117 (47.86%), Query Frame = 3 Query: 126 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRD 476 + N+F+W TI G T+YE + + FPS YP + PTVKF T +HPNV G +C+ IL ++W ++ V PN +SP N AA+ W++ Sbjct: 55 ESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDIL-------------KDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKN 158
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 38/117 (32.48%), Postives = 56/117 (47.86%), Query Frame = 3 Query: 126 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRD 476 + N+F+W TI G T+YE + + FPS YP + PTVKF T +HPNV G +C+ IL ++W ++ V PN +SP N AA+ W++ Sbjct: 55 ESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDIL-------------KDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKN 158
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.571e-13 Identity = 40/130 (30.77%), Postives = 60/130 (46.15%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR 473 L P G SA +E N+ ++V I+GP + YEGG F + P YP + P V+F T+I+HPN+ GR+C+ IL ++W P + PN + P + AK W+ Sbjct: 17 LLSEPAPGISASPSEE-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK 132
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.571e-13 Identity = 40/130 (30.77%), Postives = 59/130 (45.38%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR 473 L P G SA E N+ ++V I+GP + YEGG F + P YP + P V+F T+I+HPN+ GR+C+ IL ++W P + PN + P + AK W+ Sbjct: 17 LLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK 132
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.092e-13 Identity = 41/130 (31.54%), Postives = 60/130 (46.15%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR 473 L PV G A DE+N + V I GP D+ +EGG F + P YP + P V+F T+I+HPNV GR+C+ IL ++W P + PN + P + A++W+ Sbjct: 15 LLAEPVPGIKAE-PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.092e-13 Identity = 41/130 (31.54%), Postives = 60/130 (46.15%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR 473 L PV G A DE+N + V I GP D+ +EGG F + P YP + P V+F T+I+HPNV GR+C+ IL ++W P + PN + P + A++W+ Sbjct: 15 LLAEPVPGIKAE-PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.092e-13 Identity = 41/130 (31.54%), Postives = 60/130 (46.15%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR 473 L PV G A DE+N + V I GP D+ +EGG F + P YP + P V+F T+I+HPNV GR+C+ IL ++W P + PN + P + A++W+ Sbjct: 15 LLAEPVPGIKAE-PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130 The following BLAST results are available for this feature:
BLAST of DN617410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617410 ID=DN617410; Name=DN617410; organism=Citrus sinensis; type=EST; length=574bpback to top |