DN617410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11 Identity = 41/147 (27.89%), Postives = 64/147 (43.54%), Query Frame = 3 Query: 81 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 521 ++ +P SAG + NI+EW TI+GPP ++YEGG F ++F +YP PP V F T I+H N+ G +C+ IL + W P T+ N P A ++ R + + + +R Sbjct: 66 EITLDPPPNCSAGPKGD-NIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDIL-------------KDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKR 198
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC12_CAEEL (NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11 Identity = 37/121 (30.58%), Postives = 55/121 (45.45%), Query Frame = 3 Query: 162 IGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPA-NVEAAKEWRDRRDDFKKKVGRCVRR 521 + P + +Y GG F ++ P Y N PP VK T++WHPN+ DG +C+SIL D G W P + D + A N++AA+ W R+ F +V + R Sbjct: 65 VTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYG-------WRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISR 178
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11 Identity = 38/121 (31.40%), Postives = 55/121 (45.45%), Query Frame = 3 Query: 162 IGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTV-EXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 521 + P + Y+GG F + P Y PP VK T+IWHPN+ G +C+S+L D G W P T+ + N P N+EAA+ ++DF+ KV +RR Sbjct: 69 VSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTG-------WAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQDKEDFRDKVDEYIRR 182
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.960e-11 Identity = 39/130 (30.00%), Postives = 58/130 (44.62%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR 473 L P G SA + N + V I GP D+ +EGG FN + +YP S P V+F T+I+HPN+ GR+C+ IL ++W P + PN + P + A+ W+ Sbjct: 15 LMTEPAPGISATPATD-NFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWK 130
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2F_CHICK (NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.559e-11 Identity = 40/133 (30.08%), Postives = 61/133 (45.86%), Query Frame = 3 Query: 126 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTV-EXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 521 D + + +T+I P + Y+GG F + P Y PP VK T IWHPN+ G +C+S+L D G W P T+ + N + P N+EAA+ ++DF+ KV ++R Sbjct: 58 DPNKLHYFQLTVI-PDEGYYQGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTG-------WAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKR 182
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.559e-11 Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 3 Query: 159 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVR 518 +I P + Y+GG F YP+ PP VK T ++HPN+ +G VC++IL E W PV T+ PN E P N EAA+ ++ R F++ V R +R Sbjct: 63 VICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILR-------------EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMR 169
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.559e-11 Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 3 Query: 159 IIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVR 518 +I P + Y+GG F YP+ PP VK T ++HPN+ +G VC++IL E W PV T+ PN E P N EAA+ ++ R F++ V R +R Sbjct: 63 VICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILR-------------EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMR 169
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.343e-11 Identity = 40/139 (28.78%), Postives = 59/139 (42.45%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKK 500 L +PV G +A D+ N+ + VTI GP + YE G F + P +YP P V+F T+I+HPN+ GR+C+ +L W P + PN P + A++W K K Sbjct: 15 LVSDPVPGITAEPHDD-NLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVL-------------KTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAK 139
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 4.366e-11 Identity = 39/127 (30.71%), Postives = 57/127 (44.88%), Query Frame = 3 Query: 120 LVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYP-DGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKK 497 LVDE N E I GPPDT YEGG + + P YP +PP V+F T+IWHPN+ G +C+ IL ++W T+ + P + A +++ + FK+ Sbjct: 31 LVDE-NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-------------KDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQ 143
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 4.366e-11 Identity = 39/127 (30.71%), Postives = 57/127 (44.88%), Query Frame = 3 Query: 120 LVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYP-DGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKK 497 LVDE N E I GPPDT YEGG + + P YP +PP V+F T+IWHPN+ G +C+ IL ++W T+ + P + A +++ + FK+ Sbjct: 31 LVDE-NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-------------KDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQ 143 The following BLAST results are available for this feature:
BLAST of DN617410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617410 ID=DN617410; Name=DN617410; organism=Citrus sinensis; type=EST; length=574bpback to top |