DN617410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.376e-22 Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 524 L ++P G S G E NI +W+ I GP T +E G F ++ F YPN PPTV+F ++++HPNVY DG +C+ IL RW P + V PN SPAN +AA+ +++ + +++K+V V +S Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.376e-22 Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 524 L ++P G S G E NI +W+ I GP T +E G F ++ F YPN PPTV+F ++++HPNVY DG +C+ IL RW P + V PN SPAN +AA+ +++ + +++K+V V +S Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.376e-22 Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 524 L ++P G S G E NI +W+ I GP T +E G F ++ F YPN PPTV+F ++++HPNVY DG +C+ IL RW P + V PN SPAN +AA+ +++ + +++K+V V +S Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.376e-22 Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 524 L ++P G S G E NI +W+ I GP T +E G F ++ F YPN PPTV+F ++++HPNVY DG +C+ IL RW P + V PN SPAN +AA+ +++ + +++K+V V +S Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.376e-22 Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 524 L ++P AG S G + NI W+ I GP DT ++GG F + F +YPN PPTV+F + ++HPN+Y DG +C+ IL +W P++ V PN SPAN EAA+ + + + ++ +KV V +S Sbjct: 16 LQQDPPAGIS-GAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQS 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.225e-21 Identity = 51/132 (38.64%), Postives = 68/132 (51.52%), Query Frame = 3 Query: 135 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 530 N+ W+ IIGP DT YE G F ++ F YPN PP VKF +E++HPNVY +G +C+ IL RW P + V PN SPANVEAA ++D + + K+V V +S E Sbjct: 32 NVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDIL-------------QNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKETVEKSWE 150
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.599e-21 Identity = 50/147 (34.01%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 524 L K+P G S G + NI W+ I GP DT ++GG F + F +YPN PP V+F + ++HPN+Y DG +C+ IL +W P++ V PN +SPAN EAA+ + + + ++ +KV V +S Sbjct: 16 LQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQS 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.599e-21 Identity = 52/145 (35.86%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 90 KNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 524 ++P G SA V + N+ W+ IIGP +T +E G F ++ F YPN PP VKF ++++HPNVY G +C+ IL RW P + V PN SPANVEA+ ++D R ++K+V V S Sbjct: 18 QDPPQGVSASPVAD-NVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDIL-------------QNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVRDTVEAS 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.089e-21 Identity = 52/147 (35.37%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 524 L ++P AG S G E NI W+ I GP T +E G F + F YPN PPTV+F ++++HPNVY DG +C+ IL RW P + V PN SPAN +AA+ +++ + +++K+V V +S Sbjct: 16 LQEDPPAGVS-GAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.089e-21 Identity = 52/147 (35.37%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 84 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 524 L ++P AG S G E NI W+ I GP T +E G F + F YPN PPTV+F ++++HPNVY DG +C+ IL RW P + V PN SPAN +AA+ +++ + +++K+V V +S Sbjct: 16 LQEDPPAGVS-GAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148 The following BLAST results are available for this feature:
BLAST of DN617410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617410 ID=DN617410; Name=DN617410; organism=Citrus sinensis; type=EST; length=574bpback to top |