DN617410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.023e-16 Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 3 Query: 126 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKK 497 D NIF+W TI GP +T+Y G + + FP++YP + P VKF T +HPNV G +C+ IL ++W ++ V PN+ESP N +AA W D++ ++KK Sbjct: 57 DGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDIL-------------KDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQK-EYKK 166
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.023e-16 Identity = 45/138 (32.61%), Postives = 68/138 (49.28%), Query Frame = 3 Query: 81 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFK 494 DL K+P SAG V E ++F W TI+GP D+ Y GG F + FP +YP PP V F T+++HPN+ +G +C+ IL E+W P T+ PN + P E A ++ ++ ++ Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYE 135
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.451e-16 Identity = 46/138 (33.33%), Postives = 67/138 (48.55%), Query Frame = 3 Query: 81 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFK 494 DL K+P SAG V E ++F W TI+GP D+ Y GG F + FP +YP PP V F T+++HPN+ +G +C+ IL E+W P T+ PN + P E A ++ R ++ Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16 Identity = 45/138 (32.61%), Postives = 67/138 (48.55%), Query Frame = 3 Query: 81 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFK 494 DL K+P SAG V E ++F W TI+GP ++ Y GG F + FP +YP PP V F T+++HPN+ +G +C+ IL E+W P T+ PN + P E A ++ R ++ Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 135
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.688e-16 Identity = 41/123 (33.33%), Postives = 62/123 (50.41%), Query Frame = 3 Query: 135 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKV 503 N+F W I G DT++EGG + M F ++P++PP KF ++HPNVYP G VC+S+L D W P +++ PN E PA EA + + R +++K+V Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRV 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.688e-16 Identity = 44/138 (31.88%), Postives = 68/138 (49.28%), Query Frame = 3 Query: 81 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFK 494 DL K+P SAG V E ++F W TI+GP ++ Y GG F + FP +YP PP V F T+++HPN+ +G +C+ IL E+W P T+ PN + P E A ++ ++ ++ Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYE 135
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.311e-15 Identity = 43/131 (32.82%), Postives = 64/131 (48.85%), Query Frame = 3 Query: 108 FSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKK 500 FS G + NI+EW+ I GP T YEGG FN + FP++YP PP F T I+HPN+ +G +C++IL ++W P VE PN + P E + +++ R F ++ Sbjct: 27 FSIGQ-NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNIL-------------KDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQR 143
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15 Identity = 43/123 (34.96%), Postives = 58/123 (47.15%), Query Frame = 3 Query: 135 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKV 503 N+ W I G T +EGG F M F +YP+SPP KF ++HPNVYP G VC+SIL D W P T++ PN + PA EA + R +++K+V Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRV 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15 Identity = 43/123 (34.96%), Postives = 58/123 (47.15%), Query Frame = 3 Query: 135 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKV 503 N+ W I G T +EGG F M F +YP+SPP KF ++HPNVYP G VC+SIL D W P T++ PN + PA EA + R +++K+V Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRV 148
BLAST of DN617410 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15 Identity = 43/123 (34.96%), Postives = 58/123 (47.15%), Query Frame = 3 Query: 135 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKV 503 N+ W I G T +EGG F M F +YP+SPP KF ++HPNVYP G VC+SIL D W P T++ PN + PA EA + R +++K+V Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD-----------WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRV 148 The following BLAST results are available for this feature:
BLAST of DN617410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617410 ID=DN617410; Name=DN617410; organism=Citrus sinensis; type=EST; length=574bpback to top |