DN617405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617405 vs. ExPASy Swiss-Prot
Match: RLSX_METTH (Fused L13/S9 ribosomal protein OS=Methanobacterium thermoautotrophicum GN=rpl13p/rps9p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.877e-27 Identity = 66/133 (49.62%), Postives = 85/133 (63.91%), Query Frame = -2 Query: 207 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 605 G++KTA+A + G+G ++IN P+EL PE+ R K EP+ L G N VD+ +RV GGG Q A R IA+ LV D S ++K+ V+YDRT+LV DPRR EPKK+GGRGARAR QKSYR Sbjct: 158 GKRKTAIARGTIREGKGRVRINKVPVELYTPELARLKIMEPLKLAG-DVINDVDINVRVVGGGIVGQAEAARMVIARGLV-------DWTSDMDLKEKFVQYDRTMLVGDPRRSEPKKYGGRGARARRQKSYR 282
BLAST of DN617405 vs. ExPASy Swiss-Prot
Match: RS9_METST (30S ribosomal protein S9P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps9p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.613e-27 Identity = 69/137 (50.36%), Postives = 83/137 (60.58%), Query Frame = -2 Query: 207 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 617 V G++KTA+A K G G +K+N P+EL EPE+ R K FEP+ L G N VD+ +RV GGG Q A R IAK LV + +KD V+YDRT+LV DPRR E KKFGG GARAR QKSYR Sbjct: 5 VHTSGKRKTAIARGTVKEGTGRVKVNRKPVELYEPELARLKIFEPLELAG-DIVNSVDINVRVVGGGIMGQAEAARMVIAKGLVEY-------TGDMNLKDRYVQYDRTMLVGDPRRSESKKFGGPGARARKQKSYR 133
BLAST of DN617405 vs. ExPASy Swiss-Prot
Match: RS9_METKA (30S ribosomal protein S9P OS=Methanopyrus kandleri GN=rps9p PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.513e-26 Identity = 60/137 (43.80%), Postives = 87/137 (63.50%), Query Frame = -2 Query: 207 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 617 VQ G++KTA+A + G G +++N P+ ++EPE+ R K EP+++ G + VD+ ++V+GGG SQ A R +IA+ LV + +++D + YDR +L DPRR EPKKFGGRGARAR QKSYR Sbjct: 5 VQTTGKRKTAIARAVIREGEGRVRVNKRPVNIIEPEMARMKIMEPLIIAGEDIVSQVDIDVKVQGGGWMSQAEAARIAIARGLVEW-------TGDPDLRDAYMAYDRHMLKGDPRRKEPKKFGGRGARARRQKSYR 134
BLAST of DN617405 vs. ExPASy Swiss-Prot
Match: RS9_PYRHO (30S ribosomal protein S9P OS=Pyrococcus horikoshii GN=rps9p PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.598e-26 Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = -2 Query: 207 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 617 +Q G++KTA+A + GRG ++ING P+E++EPEI RF EP++L G +N VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K +G RA+ QKSYR Sbjct: 4 IQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
BLAST of DN617405 vs. ExPASy Swiss-Prot
Match: RS9_PYRAB (30S ribosomal protein S9P OS=Pyrococcus abyssi GN=rps9p PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.598e-26 Identity = 62/139 (44.60%), Postives = 88/139 (63.31%), Query Frame = -2 Query: 207 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 617 +Q G++KTA+A + G+G ++ING P+ELVEPEI RF EP++L G +N VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K +G RA+ QKSYR Sbjct: 4 IQTTGKRKTAIARAVIREGKGRVRINGKPVELVEPEIARFTILEPLILAGEEIWNSVDIDVKVQGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
BLAST of DN617405 vs. ExPASy Swiss-Prot
Match: RS9_PYRFU (30S ribosomal protein S9P OS=Pyrococcus furiosus GN=rps9p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.550e-26 Identity = 60/139 (43.17%), Postives = 88/139 (63.31%), Query Frame = -2 Query: 207 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 617 +Q G++KTA+A + G+G ++ING P+E++EPEI RF EP++L G +N VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV DPRR EP K +G RA+ QKSYR Sbjct: 4 IQTTGKRKTAIARAVIREGKGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSVDIDVKVEGGGFMGQAEAARMAIARALVEW-------TGDMSLKEKFMKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
BLAST of DN617405 vs. ExPASy Swiss-Prot
Match: RS9_THEVO (30S ribosomal protein S9P OS=Thermoplasma volcanium GN=rps9p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.072e-24 Identity = 63/133 (47.37%), Postives = 85/133 (63.91%), Query Frame = -2 Query: 207 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 605 G++KTAVA K+G+G+I ING P EL E+LR K EP+ L + G+D+ ++VKGGG T Q A R +IA+ +V F Q E++++ +YDRTL+V D R PKK GGRGARA+ QKSYR Sbjct: 8 GKRKTAVARAVVKKGKGIITINGTPAELYPVEVLRNKILEPV-KLAEDKAKGIDVTVKVKGGGVTGQADASRTAIARGIVKFLQ-------DNELENLFRQYDRTLIVNDVRIKLPKKPGGRGARAKKQKSYR 132
BLAST of DN617405 vs. ExPASy Swiss-Prot
Match: RS9_HALSA (30S ribosomal protein S9P OS=Halobacterium salinarium GN=rps9p PE=3 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 8.938e-24 Identity = 62/133 (46.62%), Postives = 79/133 (59.40%), Query Frame = -2 Query: 207 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 605 G+KKTAVA G G ++IN P+ELVEPE+ R K EP + G VD+ I V GGG Q A+R +IA+ LV Y E++D +DR+LLV D R+ E KK+GG GARAR+QKSYR Sbjct: 7 GKKKTAVARATVSDGEGRVRINSQPVELVEPEMARLKMLEPFRISGSDLRGDVDIDIDVAGGGFAGQADAVRTAIARGLVEHY-------GDAELRDAFREFDRSLLVNDVRQRESKKWGGPGARARYQKSYR 132
BLAST of DN617405 vs. ExPASy Swiss-Prot
Match: RS9_THEAC (30S ribosomal protein S9P OS=Thermoplasma acidophilum GN=rps9p PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.991e-23 Identity = 61/133 (45.86%), Postives = 89/133 (66.92%), Query Frame = -2 Query: 207 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 605 G++KTAVA K+G+G++ ING P+EL +LR K EP LL+ + +D+ ++V+GGG T Q A R +IA+A+V KY+++ E++++ +YDRTL+V D R PKK GGRGARA+ QKSYR Sbjct: 5 GKRKTAVARAVAKKGKGIVTINGYPVELYPVRVLRNKIMEP-LLIAEDKAKDLDIAVKVRGGGVTGQADASRTAIARAIV----KYLNDT---ELENLFRQYDRTLIVNDVRIKLPKKAGGRGARAKKQKSYR 129
BLAST of DN617405 vs. ExPASy Swiss-Prot
Match: RS9_HALMA (30S ribosomal protein S9P OS=Haloarcula marismortui GN=rps9p PE=1 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 2.601e-23 Identity = 58/133 (43.61%), Postives = 82/133 (61.65%), Query Frame = -2 Query: 207 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 605 G+KKTAVA + G G ++I+ P+ELV+PE+ + K EP + VD+ + V+GGG Q A R +IA+ L VD + E++D + +DR+LLV D R+ EPKK+GG GARAR+QKSYR Sbjct: 7 GKKKTAVARATVREGEGRVRIDSQPVELVDPELAQLKMLEPFRIAEDDLRGEVDVEVSVEGGGVMGQADAARTAIARGL-------VDHTNDAELRDAFMEFDRSLLVNDVRQSEPKKWGGPGARARYQKSYR 132 The following BLAST results are available for this feature:
BLAST of DN617405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617405 ID=DN617405; Name=DN617405; organism=Citrus sinensis; type=EST; length=621bpback to top |