DN617404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12 Identity = 58/202 (28.71%), Postives = 93/202 (46.04%), Query Frame = 3 Query: 21 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESHFMPVRSLV 626 LK H ++V +V + P E L + S D+ +K+W D + E+T +GH LG+ VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G SV++WD T + TL P P V +V ++ DG I S DG ++D + L L P S V Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12 Identity = 58/202 (28.71%), Postives = 93/202 (46.04%), Query Frame = 3 Query: 21 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESHFMPVRSLV 626 LK H ++V +V + P E L + S D+ +K+W D + E+T +GH LG+ VA + SAS D ++++DV + + TL+ + V+ F+P+ + L V+G SV++WD T + TL P P V +V ++ DG I S DG ++D + L L P S V Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTL----PAHSDP---------VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: PRP4_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12 Identity = 55/187 (29.41%), Postives = 83/187 (44.39%), Query Frame = 3 Query: 42 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESH 602 H+E V + P + L T S D T KLW+ D L+ T GH + VA HPSG + S D R++D++T A + E V+ + F G LA + G + ++WD T I +KP V SV +SP+G +A G D ++D+ K L+ + +H Sbjct: 297 HKERATDVVFSPVDDC----LATASADRTAKLWKTDGTLLQ-TFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDG-ALAASCGLDSLARVWDLRTGRSILVFQ----GHIKP---------VFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAH 464
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.755e-12 Identity = 45/167 (26.95%), Postives = 77/167 (46.11%), Query Frame = 3 Query: 102 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESH 602 + TGS D+T KLW + + T GH +V ++ +P + A+ S+D+ +++D+ + + TL +E+ + FD G + + G +V +WD +T + TL E + S +S D I GSMD T ++D T K + L H Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI-ITGSFDHTVVVWDASTGRKVHTLIGHCAE-------------ISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGH 302
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 51/175 (29.14%), Postives = 79/175 (45.14%), Query Frame = 3 Query: 78 ATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESH 602 A + L+ TGS+D T KLW + T +GH ++S++ + +G + S D V V+++ + I TL E+ QF+ + +A A S KLWD+ +ATL+ E VL V + G+ +A S DGT V+ + K L LE H Sbjct: 184 AFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATA-SMDKSCKLWDSLNGKCVATLTGHEDE-------------VLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGH 344
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.598e-12 Identity = 49/176 (27.84%), Postives = 84/176 (47.73%), Query Frame = 3 Query: 99 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESHFMPVRSLV 626 L++ GS ++++W + ++ RT GH V S+ HP G AS SLD+ ++++DV + + V ++F P G LA A SVKLWD ++A L S K V + + P+ +A GS D T+ +D+ + + + E +PVR+++ Sbjct: 77 LIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASA-SDDHSVKLWDLTAGKMMAEL-------------SEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAIL 238
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.699e-12 Identity = 49/176 (27.84%), Postives = 84/176 (47.73%), Query Frame = 3 Query: 99 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESHFMPVRSLV 626 L++ GS ++++W + ++ RT GH V S+ HP G AS SLD+ ++++DV + + V ++F P G LA A SVKLWD ++A L S K V + + P+ +A GS D T+ +D+ + + + E +PVR+++ Sbjct: 77 LIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASA-SDDHSVKLWDLTAGKMMAEL-------------SEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAIL 238
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: KTNB1_ARATH (Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 4.699e-12 Identity = 49/175 (28.00%), Postives = 83/175 (47.43%), Query Frame = 3 Query: 42 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 566 H + +VT+ + L+ G+ T+KLW ++ ++ RT TGH +SV HP G AS SLD+ ++++D+ I T + V ++F P G + V+GG VK+WD L+ T+ S + + S+ + P +A GS D T+ +D+ Sbjct: 58 HSSGIDSVTF----DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWV-VSGGEDNIVKVWDLTAGKLL-------------TEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 52/176 (29.55%), Postives = 82/176 (46.59%), Query Frame = 3 Query: 36 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFD 563 + H ++V AV + P +LL +GS D TV LW T GH GV VA +P+G A+A+ D ++++D +T A + TL + V+ FD L +G +++LWD + + + P P V S A+S DG + S+DG I ++D Sbjct: 37 SGHTKAVAAVKFSPDG----SLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREV----PAHSDP---------VTSAAFSYDGSMVVTSSLDGLIRLWD 195
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: GBLP_BIOGL (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Biomphalaria glabrata PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 49/179 (27.37%), Postives = 87/179 (48.60%), Query Frame = 3 Query: 33 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 569 ++ H + V + P T+ ++++ D VK+W + +L+ + GH V +V P G + AS DS ++D++ + TL+ + + + F P L VA G S+K+WD ++ L +PE + T K+ + LS+AWS DG+ + G D I V+ V+ Sbjct: 144 DDCHTDWTSCVRFSPNTQN--PIIVSSGWDRLVKVWNLTNCKLKTNHYGHTGYVNTVTVSPDGSLCASGGKDSQAMLWDLNEGKHLYTLDGAGDTINALCFSPNRYWLCVASG--PSIKIWDLEGKVVVDEL---KPEVMGTTSKAPT---CLSLAWSADGQTLFAGYTDKLIRVWQVS 312 The following BLAST results are available for this feature:
BLAST of DN617404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617404 ID=DN617404; Name=DN617404; organism=Citrus sinensis; type=EST; length=627bpback to top |