DN617404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: GBLP_BRANA (Guanine nucleotide-binding protein subunit beta-like protein OS=Brassica napus GN=GB1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.332e-11 Identity = 52/183 (28.42%), Postives = 87/183 (47.54%), Query Frame = 3 Query: 42 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS---SSKKFVL---SVAWSPDGRRIACGSMDGTISVFDVTR 572 H + V V + P T +++ S D+TVK+W + +L T GH V +VA P G + AS D V ++D+ + +LEA+ S + + F P L A +K+WD + ++ L + + +D S ++K+ V+ S+ WS DG + G DG I V+ + R Sbjct: 149 HRDWVSCVRFSP--NTLQPTIVSASCDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFTPNRYWLCAA--TEQGIKIWDLESKTVVEDLKVDLKAEAEKSDGSGTAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 326
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: NLE1_BOVIN (Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 46/157 (29.30%), Postives = 75/157 (47.77%), Query Frame = 3 Query: 93 PALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 560 P L++GS D T+ LW P +D + TGH + V P + ASAS D ++++D T +A+L + V+Q+ + + L V+G +++K+WD L TD V +V WSPDG+R+A G D + ++ Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKL-------------STDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 49/175 (28.00%), Postives = 82/175 (46.86%), Query Frame = 3 Query: 102 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESHFMPVRSLV 626 ++ GSL +++LW + ++ RT GH + S+ HP G AS S+DS ++++DV + + V + F P G LA A S +VKLWD +I T+ +S V V + P+ +A GS D T+ ++D+ + + E VRS++ Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDS-TVKLWDLIAGKMI-------------TEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVL 238
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: GBLP_NICPL (Guanine nucleotide-binding protein subunit beta-like protein OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11 Identity = 51/184 (27.72%), Postives = 88/184 (47.83%), Query Frame = 3 Query: 36 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP-RPEGLKPTDKSSSKK----FVLSVAWSPDGRRIACGSMDGTISVFDVTR 572 ++H + V V + P +P ++ +GS D TVK+W + +L T GH V + A P G + AS D + ++D+ + +LE S S + + F P L A +S+K+WD + ++ L + + E + ++S K + S+ WS DG + G DG I V+ + R Sbjct: 147 DSHSDWVSCVRFSP-NNLQPTIV-SGSWDRTVKIWNLTNCKLRATLAGHTGYVNTTAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE-SGSIIHSLCFSPNRYWLCAA--TESSIKIWDLESKTIVDDLKVDLKQESEMSAEGTASGKNKVIYCTSLGWSADGSTLFSGYTDGLIRVWGIGR 325
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11 Identity = 54/175 (30.86%), Postives = 72/175 (41.14%), Query Frame = 3 Query: 42 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 566 H VW V P + +GS D T +LW D R GH V V HP+ A+ S D VR++ S+ V + F P G LA A G +KLWD A+ L L TD + S+A+SPD IA SMD ++ V+D+ Sbjct: 383 HAYPVWDVDISPFS----LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASA-GEDQRLKLWDLASGTLFKELR-------GHTDS------ITSLAFSPDSGLIASASMDNSVRVWDI 539
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: LIS1_DICDI (Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.195e-11 Identity = 51/200 (25.50%), Postives = 88/200 (44.00%), Query Frame = 3 Query: 24 KSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESHFMPVRSL 623 K + H + +V + P+ +L+++ S D T+K+W + + ERT GH V + +G + AS S D ++++D T + TL V ++F P G L ++ ++K+W+ AT I TL + +V + S DG IA S D TI +++ + + L H V L Sbjct: 99 KHILTGHRNCINSVKFHPSF----SLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQL-ISSSRDKTIKVWEAATGYCIKTL-------------VGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECL 280
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: FBXW7_DROME (F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.195e-11 Identity = 48/165 (29.09%), Postives = 77/165 (46.67%), Query Frame = 3 Query: 99 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL 593 L+++G+ D VK+W P+ + T GH V S+ G+ S SLD+ +RV+DV+T TL S M+ + V+G ++VK+WD T + TLS P T + +FV++ S DGT+ ++DV F+ +L Sbjct: 1127 LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN---ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVT------------SSDDGTVKLWDVKTGDFIRNL 1274
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: WDR69_BOVIN (WD repeat-containing protein 69 OS=Bos taurus GN=WDR69 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11 Identity = 48/168 (28.57%), Postives = 74/168 (44.05%), Query Frame = 3 Query: 99 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESH 602 L+ TGS+D T KLW + T TGH ++S++ + SG + S D V V++ DT + TL +E+ F+ +L + G + KLWD +ATL+ E +L + G+ IA S DGT +F + + LE H Sbjct: 191 LVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN-WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE-------------ILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGH 344 HSP 2 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 46/155 (29.68%), Postives = 75/155 (48.39%), Query Frame = 3 Query: 96 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 560 +L+LTGS+D+T KLW + + T TGH ++ +G + A+AS D R+F T + LE E+ ++ F+P+G L + G + ++WD T + L EG TD+ + S A++ G I GS D T ++ Sbjct: 274 SLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRL-LTGSSDKTARIWDAQTGQCLQVL-----EG--HTDE------IFSCAFNYKGDIIITGSKDNTCRIW 414
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: REC14_SCHPO (Meiotic recombination protein rec14 OS=Schizosaccharomyces pombe GN=rec14 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11 Identity = 52/202 (25.74%), Postives = 81/202 (40.10%), Query Frame = 3 Query: 33 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQ---LERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNA--SIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESHFMPVRSL 623 ENAH+ ++++ V L + S D +K W D + +E +T H LGV +A + S V V++ +TN + PSE W P G T+A + +WD P K ++ + KF L + +SP+GR I G G + + + H L H PVRS+ Sbjct: 12 ENAHQADIYSLNVVAGN------LWSASGDSKIKKWSIGDAEHSLVEEIDTPHKLGVHHLATSLDENVVVSCGFGQDVYVWNPETNEFRDLGNNAQHPSECWSSCISPDGQTIAFTSV-DGRIAVWDN-------------PSDCKISELDTKGKFGLCIDYSPNGRFIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSV 193
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: NLE1_PONAB (Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 3 Query: 93 PALLLTGSLDETVKLWRPDDMQLERTN-TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 560 P L++GS D T+ LW P + + T TGH + V P I ASAS D ++++D T +A+L + V+Q+ + + L V+G +++K+WD L L E V +V WSPDG+R+A G D + ++ Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADE-------------VYAVDWSPDGQRVASGGKDKCLRIW 483 The following BLAST results are available for this feature:
BLAST of DN617404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617404 ID=DN617404; Name=DN617404; organism=Citrus sinensis; type=EST; length=627bpback to top |