DN617391

Overview
NameDN617391
Unique NameDN617391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11071 contig Csv1_Contig11071:446..962. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617391 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.143e-12
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = -1 
Query:  202 LDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDAELDEHILYLRDFVQELNKALAVDPRIEICQLSIADGVTLCRRI 510
            L +LI D+    T+DFVF+DADK  Y  Y++  ++L++ GG+I  DN L  G  VA P+A ++ +++ +R     LN  +  D R+    L IADG+TL  +I
Sbjct:  134 LQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLVAIR----ALNDKILADKRVTKSLLPIADGITLITKI 230
The following BLAST results are available for this feature:
BLAST of DN617391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CAMT2_DICDI4.143e-1238.83Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01C08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617391 ID=DN617391; Name=DN617391; organism=Citrus sinensis; type=EST; length=519bp
TTGATTACTTTTATTAAAGTGGCCTTGACAATAAAATATAACATTTATTT
TTTAAAAAGTTATTAACTTAAGAAAGACAATAATACATTTTTCCAAACAC
TCATAAGTCTAATTTATTTGTGGATTCTACGGTCATAACCACACATAGTT
TAAAAGTTACGACACAACCAGCCTCATGAGTGAAAATTGAGAGGATCAGC
CAATGCGGCGACATAATGTAACCCCATCAGCAATGGAGAGCTGGCAAATC
TCAATCCTTGGATCAACGGCCAGGGCCTTGTTGAGTTCCTGCACAAAATC
CCTCAAGTATAAGATATGCTCATCCAGTTCGGCATCAGGTTGTGCCACCA
CGGATCCACCCCACAAGGTGTTGTCGTAGCCAATCACTCCCCCAACCTTC
ACAAGCTCAATAAGCCTCTTGTGGTAATTAATGTAGTTATTCTTGTCAGC
ATCAACAAAGACGAAGTCGAATGTCCCATGATATTTTTCGTCTTGGATCA
ATTGATCAAGAAGAGGAAG
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