DN617390

Overview
NameDN617390
Unique NameDN617390
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12554 contig Csv1_Contig12554:52..848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.830e-32
Identity = 75/212 (35.38%), Postives = 124/212 (58.49%), Query Frame = 3
Query:  171 DNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDK----VGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI 794
            + +   RR+  YQP++WD   +Q  +S Y +E +  RA  +  +V   +++  + + +LELID+L+RLG++ HF+ E             + +  + +LY+T+L F+LLRQ+ + VSQEVF  FK+DK       + DD +G+L L+EAS+ S +GE  +  A  F +K L + ++     ++D+ +    +RALELP HW+V M  AR FI
Sbjct:   51 NEIQTGRRTGGYQPTLWDFSTIQLFDSEYKEEKHLMRAAGMIAQVNMLLQEEVDSIQRLELIDDLRRLGISCHFDREIVEILNSKYYTNNEID--ESDLYSTALRFKLLRQYDFSVSQEVFDCFKNDKGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLHLARDFATKFLHKRVLV----DKDINLLSSIERALELPTHWRVQMPNARSFI 256          
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: TPS02_ARATH (Probable terpenoid synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS02 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.899e-28
Identity = 68/175 (38.86%), Postives = 108/175 (61.71%), Query Frame = 3
Query:  291 LKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNS---KEEDVFVAEQAKRALELPLHWKVPMLEARWFIH 797
            ++ +V+TA K +    ++LE+ID+LQRLG++YH++ E             +     ++L+ATSLEF LLRQHG+ VSQ+ F  F  +   F   +  D KG+LSL+EASY+S++ E  ++E   + +K L E +  S+    +E++ ++ E  KRALE P HW +  LEARW+I+
Sbjct:   93 MRKEVETAEKAILFK-EELEMIDSLQRLGISYHYKHEIHDILRKIHDQHGEIERETQDLHATSLEFILLRQHGFDVSQDAFDVFISETGEFRKTLHSDIKGLLSLYEASYFSMDSEFKLKETRIYANKRLSEFVAESSKTICREDETYILEMVKRALETPYHWSIRRLEARWYIN 266          
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.361e-26
Identity = 74/206 (35.92%), Postives = 115/206 (55.83%), Query Frame = 3
Query:  189 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKV-KTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI 794
            R  A++QPSIW   FL   + N   ET KR  ++LK +V K  +  +     +L  ID++QRLG++YHF  E             D    + +LY TSL FRLLR+HG+ VS +VF+ FKD++  F   +  D +G+L L++ASY  + GE I++EA  FT+ HL   + +      D  ++E+   AL+  +   +P +EAR ++
Sbjct:   22 RPKADFQPSIWGDLFLNCPDKNIDAETEKRH-QQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNND---AENDLYTTSLRFRLLREHGFNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTNHLSLAVASL-----DYPLSEEVSHALKQSIRRGLPRVEARHYL 218          
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.778e-26
Identity = 74/206 (35.92%), Postives = 115/206 (55.83%), Query Frame = 3
Query:  189 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKV-KTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI 794
            R  A++QPSIW   FL   + N   ET KR  ++LK +V K  +  +     +L  ID++QRLG++YHF  E             D    + +LY TS+ FRLLR+HGY VS +VF+ FKD++  F   +  D +G+L L++ASY  + GE I++EA  FT+ HL   + +      D  ++E+   AL+  +   +P +EAR ++
Sbjct:   22 RPKADFQPSIWGDLFLNCPDKNIDAETEKRH-QQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNND---AENDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTHHLSLAVASL-----DHPLSEEVSHALKQSIRRGLPRVEARHYL 218          
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.172e-26
Identity = 75/206 (36.41%), Postives = 116/206 (56.31%), Query Frame = 3
Query:  189 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKV-KTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI 794
            R  A++QPSIW   FL   + N    T KR  ++LK +V K  +  +     +L  ID++QRLG++YHF  E             D    + +LY TSL FRLLR+HGY VS +VF+ FKD++  F   +  D +G+L L++ASY  + GE I++EA  FT+ HL  + ++S     D  ++E+   AL+  +   +P +EAR ++
Sbjct:   22 RPKADFQPSIWGDFFLNCPDKNIDAGTEKRH-QQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNND---AENDLYTTSLRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVQGLLELYQASYLRVHGEDILDEAISFTTNHL-SLAVSS----LDHPLSEEVSHALKQSIRRGLPRVEARHYL 218          
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.172e-26
Identity = 88/226 (38.94%), Postives = 123/226 (54.42%), Query Frame = 3
Query:  138 KPVQ-CLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTD-ETYKRRAEELKGKVKTA-IKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKE-NLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI 794
            KP Q CL ST +  +   R  A + P++W + F  SL  N ++ E+Y  R   LK KVK   I   ++ ++ + LID L RLG++YHFE +             D    KE +LY  ++ FR+ RQHG+ +S +VFS FKD    F   +  D KG+LSL EAS+ S+ GE I+EEA+ FT  +L+     S++ E    +      ALE P H  VP LEAR FI
Sbjct:   49 KPTQACLSSTTHQEV---RPLAYFPPTVWGNRFA-SLTFNPSEFESYDERVIVLKKKVKDILISSTSDSVETVILIDLLCRLGVSYHFENDIEELLSKIFNSQPDLVDEKECDLYTAAIVFRVFRQHGFKMSSDVFSKFKDSDGKFKESLRGDAKGMLSLFEASHLSVHGEDILEEAFAFTKDYLQ-----SSAVELFPNLKRHITNALEQPFHSGVPRLEARKFI 265          
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.152e-25
Identity = 74/206 (35.92%), Postives = 114/206 (55.34%), Query Frame = 3
Query:  189 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKV-KTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI 794
            R  A++QPSIW   FL   + N   ET KR  ++LK +V K  +  +     +L  ID++Q LG++YHF  E             D    + +LY TSL FRLLR+HG+ VS +VF+ FKD++  F   +  D +G+L L++ASY  + GE I++EA  FTS HL   + +      D  ++E+   AL+  +   +P +EAR ++
Sbjct:   22 RPKADFQPSIWGDFFLNCPDKNIDAETQKRH-QQLKEEVRKMIVAPMANSTLKLAFIDSVQGLGVSYHFTKEIEDELENIYHNNND---AENDLYTTSLRFRLLREHGFHVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTSNHLSLAVASL-----DHPLSEEVSHALKQSIRRGLPRVEARHYL 218          
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 1.664e-24
Identity = 72/206 (34.95%), Postives = 107/206 (51.94%), Query Frame = 3
Query:  189 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPL-DQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI 794
            R  A++ PS+W   FL     N   E Y +  E LK + +  +      L D L LID ++RLG++YHFE E             + N    +L  ++L+FRLLRQHG+ +S E+FS F+D+   F   +  D  G+L+L+EAS+     + I+E+A  F++ HL+       S      + EQ   ALE  LH  VP +E R+FI
Sbjct:   15 RPVADFSPSLWGDQFLSFSIKNQVAEKYAKEIEALKEQTRNMLLATGMKLADTLNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLESAAPHLKSP-----LREQVTHALEQCLHKGVPRVETRFFI 211          
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: TPSD2_ABIGR (Myrcene synthase, chloroplastic OS=Abies grandis GN=ag2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.322e-24
Identity = 76/235 (32.34%), Postives = 121/235 (51.49%), Query Frame = 3
Query:  183 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDV-----------TEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWR--KEN------------LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI 794
            V RR  +Y  +IWD DF+QSL++ Y + +Y+ RAE L  +VK     +            + + +L ++D+++RLG+A HF+ E             DY +R  +EN            L +T+L FR LR HGY VS EV   F+D    F+C       + + +L+L+ AS  +  GE +MEEA  F++++LKE +     K     ++++ K  +E   H  +P LEAR +I
Sbjct:   62 VQRRIGDYHSNIWDDDFIQSLSTPYGEPSYQERAERLIVEVKKIFNSMYLDDGRLMSSFNDLMQRLWIVDSVERLGIARHFKNEITSAL--------DYVFRYWEENGIGCGRDSIVTDLNSTALGFRTLRLHGYTVSPEVLKAFQDQNGQFVCSPGQTEGEIRSVLNLYRASLIAFPGEKVMEEAEIFSTRYLKEAL----QKIPVSALSQEIKFVMEYGWHTNLPRLEARNYI 284          
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.322e-24
Identity = 75/209 (35.89%), Postives = 110/209 (52.63%), Query Frame = 3
Query:  183 VDRRSANYQPSIWDHDFL--QSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI 794
            V R +AN+   IW   FL          ++  K   EE+K ++ TA+   T+  + L+ ID ++RLG+AY+FE E             D  W   N   TSL FRL+RQHG+ VS ++FS +KD +  F   +  D  G+L L+EA+Y  + GE I+++A  FT   L E  I  N    +  V+ Q + AL  PLH ++P LEA  +I
Sbjct:    8 VIRPNANFPSEIWGDQFLAYDQDEQEGVEQVIKDLKEEVKSELLTALNSPTQHTELLKFIDAIERLGIAYYFEEEINQVFQHMYTAYGD-KWTGGN---TSLWFRLMRQHGFFVSSDIFSTYKDKEGRFKESLEKDVHGLLELYEAAYMFVPGEGILDDALVFTRTCLDE--IAKNPSLSNSAVSSQIREALTQPLHKRLPRLEALRYI 210          
The following BLAST results are available for this feature:
BLAST of DN617390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
SCS_SALOF4.830e-3235.381,8-cineole synthase, chloroplastic OS=Salvia offi... [more]
TPS02_ARATH1.899e-2838.86Probable terpenoid synthase 2, chloroplastic OS=Ar... [more]
DCS2_GOSAR1.361e-2635.92(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS1_GOSAR1.778e-2635.92(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS4_GOSAR5.172e-2636.41(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
CASS_RICCO5.172e-2638.94Casbene synthase, chloroplastic OS=Ricinus communi... [more]
DCS1_GOSHI1.152e-2535.92(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
5EAS_TOBAC1.664e-2434.95Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
TPSD2_ABIGR6.322e-2432.34Myrcene synthase, chloroplastic OS=Abies grandis G... [more]
ECS1_ARTAN6.322e-2435.89Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01C07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617390 ID=DN617390; Name=DN617390; organism=Citrus sinensis; type=EST; length=797bp
GTAAGCTAGCTTACACTGCATCTGTATATCCAATGTCTTCTTGCATTAAT
CCCTCAACCTTGGCTACCTCTGTAAATGGTTTCAAATGTCTTCCTCTTGC
AACAAATAGAGCAGCCATCAGAATCATGGCAAAAAATAAGCCAGTCCAAT
GCCTTGTCAGCACCAAATATGATAATTTGACAGTTGATAGGAGATCAGCA
AACTACCAACCTTCAATTTGGGACCATGATTTTTTGCAGTCACTGAATAG
CAACTATACGGATGAAACATACAAAAGACGAGCAGAAGAGCTGAAGGGAA
AAGTGAAGACAGCGATTAAGGATGTAACCGAGCCTCTGGATCAGTTGGAG
CTGATTGATAATTTGCAAAGACTTGGATTGGCTTATCATTTTGAGCCTGA
GATTCGGAACATATTGCGTAATATCCACAACCATAATAAAGATTATAATT
GGAGAAAAGAAAATCTGTATGCAACCTCCCTTGAATTCAGACTACTTAGA
CAACATGGCTATCCTGTTTCTCAAGAGGTTTTCAGTGGTTTTAAAGACGA
CAAGGTAGGCTTCATTTGTGATGATTTCAAGGGAATACTGAGCTTGCATG
AAGCCTCGTATTACAGCTTAGAAGGAGAAAGCATCATGGAGGAGGCCTGG
CAATTCACCAGTAAGCATCTTAAAGAAATGATGATCACCAGCAACAGCAA
GGAAGAGGATGTATTTGTAGCAGAACAAGCGAAGCGGGCGCTGGAGCTCC
CTCTGCATTGGAAAGTGCCTATGTTAGAGGCAAGGTGGTTCATACAC
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