DN617390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: LINS_ARATH (Linalool synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS14 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.250e-12 Identity = 55/194 (28.35%), Postives = 91/194 (46.91%), Query Frame = 3 Query: 225 HDFLQSLNSNYTDETYKRRAEELK-GKVKTAIK-DVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWF 791 H + + + + ++T + EL K+K + +V P + LE+ID +Q LG HF +N +L+ +L FRLLRQ G+ V + +F D K GF + +D KG+ L EAS +EGE ++ A +FT L E+ S ++ ++ ++L P H V L ++ F Sbjct: 52 HASVSNPSKQFHNKTSLEYSHELNIKKIKNILSANVDVPSENLEMIDVIQSLGTDLHFRQGIEQTLHMIYKEGLQFNG---DLHEIALRFRLLRQEGHYVQESIFKNILDKKGGFKDVVKNDVKGLTELFEASELRVEGEETLDGAREFTYSRLNELCSGRESHQK-----QEIMKSLAQPRHKTVRGLTSKRF 237
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: TPSD1_GINBI (Levopimaradiene synthase, chloroplastic OS=Ginkgo biloba GN=LPS PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.469e-12 Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 3 Query: 333 PLDQLE---LIDNLQRLGLAYHFEPEXXXXXXXXXXXX---KDYNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKG--------ILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAE---QAKRALELPLHWKVPMLEARWFI 794 PLD E +D ++RLG+ +F+ E + W + N + T++ R+LR HGY VS +V F+D+K F C F G L+L+ S GE IMEEA FT+ HL+ + +N+ ++ + + + A++ P H +P LEAR +I Sbjct: 352 PLDLFERLWAVDTVERLGIDRYFKKEIKESLDYVYRYWDAERGVGWARCNPIPDVDDTAMGLRILRLHGYNVSSDVLENFRDEKGDFFC--FAGQTQIGVTDNLNLYRCSQVCFPGEKIMEEAKTFTTNHLQNALAKNNAFDKWAVKKDLPGEVEYAIKYPWHRSMPRLEARSYI 524
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: KSA_ARATH (Ent-copalyl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=GA1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.110e-11 Identity = 60/215 (27.91%), Postives = 102/215 (47.44%), Query Frame = 3 Query: 204 YQPSIWDHDFLQSLNSNYTDETYKRRA-EELKGKVKTAIKDVTEPLDQLE---LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN--WRK----ENLYATSLEFRLLRQHGYPVSQEVFSGFKDDK-----VGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAE---QAKRALELPLHWKVPMLEARWFI 794 + PS F+Q+ +SN + Y R A + G V P+D E ++D LQRLG++ +FE E D W + +++ T++ FRLLRQHGY VS +VF F+ + VG G+ +L+ AS + E I++ A +F+ +L E ++ + + + + ALE+P + +P +E R++I Sbjct: 288 FSPSSTAFAFMQTRDSNCLE--YLRNAVKRFNGGVPNVF-----PVDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSADVFKNFEKEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREELIDKWIIMKDLPGEIGFALEIPWYASLPRVETRFYI 495
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: TPSD1_PICAB (Levopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-LAS PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 51/174 (29.31%), Postives = 85/174 (48.85%), Query Frame = 3 Query: 333 PLDQLE---LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKG--------ILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVF---VAEQAKRALELPLHWKVPMLEARWFI 794 PLD E +D ++RLG+ HF+ E + W +EN + T++ R+LR HGY VS +V F+D+ F C F G +L+++ S+ + GE+IMEEA T ++L+ + + ++ + + + AL+ P H +P LEAR +I Sbjct: 340 PLDLFERLWAVDTIERLGIDRHFKEEIKDALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFC--FLGQTQRGVTDMLNVNRCSHVAFPGETIMEEAKTCTERYLRNALEDVGAFDKWALKKNIRGEVEYALKYPWHRSMPRLEARSYI 511
BLAST of DN617390 vs. ExPASy Swiss-Prot
Match: TPSD2_PICAB (Isopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-ISO PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 50/174 (28.74%), Postives = 86/174 (49.43%), Query Frame = 3 Query: 333 PLDQLE---LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKG--------ILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVF---VAEQAKRALELPLHWKVPMLEARWFI 794 PLD E +D ++RLG+ +HF+ E + W +EN + T++ R+LR HGY VS +V F+D+ F C F G +L+++ S+ + GE+IM+EA T ++L+ + + ++ + + + AL+ P H +P LEAR +I Sbjct: 348 PLDLFERLWAVDTVERLGIDHHFKEEIKDALDYVYSHWDERGIGWARENPIPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFC--FLGQTQRGVTDMLNVNRCSHVAFPGETIMQEAKLCTERYLRNALEDVGAFDKWALKKNIRGEVEYALKYPWHRSMPRLEARSYI 519 The following BLAST results are available for this feature:
BLAST of DN617390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617390 ID=DN617390; Name=DN617390; organism=Citrus sinensis; type=EST; length=797bpback to top |