DN617388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_CANFA (Aminomethyltransferase, mitochondrial OS=Canis familiaris GN=AMT PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 8.970e-23 Identity = 56/116 (48.28%), Postives = 70/116 (60.34%), Query Frame = -3 Query: 122 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 469 E L+W + KRRRA F GA I+ QL RRVG G P R+HS + + +G IG +TSG SPCLKKN+AMGYV S + GT + +EVR K ++KMPFV T YY Sbjct: 285 EGSLSWTLGKRRRAAMDFPGASVIIAQLKGKVQRRRVGLTCEGAPVRAHSPILNMEGTVIGTVTSGCPSPCLKKNVAMGYVPSEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYY 400
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_HUMAN (Aminomethyltransferase, mitochondrial OS=Homo sapiens GN=AMT PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.409e-22 Identity = 55/116 (47.41%), Postives = 70/116 (60.34%), Query Frame = -3 Query: 122 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 469 E L+W + KRRRA F GA+ I+ QL RRVG G P R+HS + + +G IG +TSG SP LKKN+AMGYV + GT + +EVR K ++KMPFVPT YY Sbjct: 285 EGSLSWTLGKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCPSPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYY 400
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_BOVIN (Aminomethyltransferase, mitochondrial OS=Bos taurus GN=AMT PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.814e-22 Identity = 54/116 (46.55%), Postives = 67/116 (57.76%), Query Frame = -3 Query: 122 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 469 E L+W + KRRRA F GA I+ QL RRVG G P R+ S + +G IG +TSG SPCLKKN+AMGYV + GT + +EVR K ++KMPFV T YY Sbjct: 279 EGSLSWTLGKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCPSPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVVSKMPFVSTNYY 394
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_MOUSE (Aminomethyltransferase, mitochondrial OS=Mus musculus GN=Amt PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.692e-21 Identity = 54/116 (46.55%), Postives = 70/116 (60.34%), Query Frame = -3 Query: 122 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 469 E L+W + KRRR F GA+ I+ QL RRVG G P R+HS + + +G IG +TSG SP LKKN+AMGYV + GT++ +EVR K ++KMPFVPT YY Sbjct: 285 EGSLSWTLGKRRRIAMDFPGAKIIVPQLKGEVQRRRVGLICEGAPVRAHSPILNTEGTVIGTVTSGCPSPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYY 400
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_YEAST (Aminomethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=GCV1 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 6.884e-15 Identity = 53/126 (42.06%), Postives = 67/126 (53.17%), Query Frame = -3 Query: 119 EAGLTWAIEKRRR----AEGGFLGAEKILKQLDEGPPVR-RVGF--FAGGPPARSHSKVH-DEQGNPIGEITSGGFSPCLKK-NIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 469 EA L W I K RR + F G KI+ QL+ + RVGF GP AR+ K+ + +G +TSG SP L NI YV+ G HK GTK+ ++VR K Y + KMP VPT YYK Sbjct: 274 EAALNWVISKSRRDLVDQKYWFNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLNNINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYYK 399
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_PROMM (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvT PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 9.941e-14 Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = -3 Query: 113 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 469 EAGL W + A F+G + +Q ++GP R VG G H N +GEITSG +SP L++ IA+GY+ + L + G +V++E+RGK + + K PF Y +PS Sbjct: 260 EAGLGWLVHLEMPAP--FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLEEAIALGYLPTALARIGNEVEVEIRGKHHRATVVKRPF----YRRPS 372
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_PROM3 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvT PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = -3 Query: 113 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 469 EAGL W + A F+G + +Q ++GP R VG G H N +GEITSG +SP L + IA+GY+ + L + G +V +E+RGK + + K PF Y +PS Sbjct: 260 EAGLGWLVHLEMPAP--FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLGEAIALGYLPTALARIGNEVAVEIRGKHHPATVVKRPF----YRRPS 372
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_LEPIN (Aminomethyltransferase OS=Leptospira interrogans GN=gcvT PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13 Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = -3 Query: 134 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 469 E+G+ W ++++ E + +EKIL Q G P + V F AG P R + +V D QGN IG+ TSG FSP LKK I + ++S K G ++IE+R + IT PF+P Sbjct: 256 ESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_LEPIC (Aminomethyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvT PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13 Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = -3 Query: 134 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 469 E+G+ W ++++ E + +EKIL Q G P + V F AG P R + +V D QGN IG+ TSG FSP LKK I + ++S K G ++IE+R + IT PF+P Sbjct: 256 ESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365
BLAST of DN617388 vs. ExPASy Swiss-Prot
Match: GCST_SYNS9 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9902) GN=gcvT PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.176e-12 Identity = 37/110 (33.64%), Postives = 57/110 (51.82%), Query Frame = -3 Query: 140 EAGLTWAIEKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 469 EAGL W + A+ F+G + + + + GP R VG G H G P+G +TSG +SP L++ IA+ + + L K GT + +E+RGKA + + PF Sbjct: 254 EAGLGWLVHLEMPAD--FIGRQALERAAETGPNKRLVGLKLEGRAIARHDYPVLHNGEPVGVVTSGTWSPTLEEPIALASIPTALAKLGTNLSVEIRGKAQPATVVRRPF 361 The following BLAST results are available for this feature:
BLAST of DN617388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617388 ID=DN617388; Name=DN617388; organism=Citrus sinensis; type=EST; length=471bpback to top |