DN617385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617385 vs. ExPASy Swiss-Prot
Match: VATH1_CAEEL (Probable V-type proton ATPase subunit H 1 OS=Caenorhabditis elegans GN=vha-18 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.563e-13 Identity = 34/95 (35.79%), Postives = 59/95 (62.11%), Query Frame = -3 Query: 281 SPMHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIVTDLKAKERVMKLMNHENTEVTKSALLCIQRLFL 565 SP HK +FW +N +N ++L++L+ +L+ S+DP L VA D+ +F++Y+P G++ V L KE +M+L+ ++ V ALL Q+L + Sbjct: 347 SPAHKCEVFWNENAHRLNDNRQELLKLLVAMLEKSNDPLVLCVAAHDIGEFVRYYPRGKLKVEQLGGKEAMMRLLTVKDPNVRYHALLAAQKLMI 441
BLAST of DN617385 vs. ExPASy Swiss-Prot
Match: VATH1_CAEBR (Probable V-type proton ATPase subunit H 1 OS=Caenorhabditis briggsae GN=vha-18 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.041e-13 Identity = 35/95 (36.84%), Postives = 59/95 (62.11%), Query Frame = -3 Query: 281 SPMHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIVTDLKAKERVMKLMNHENTEVTKSALLCIQRLFL 565 SP HK +FW +N +N ++L++L+T+L+ S+DP L VA D+ +F++Y+P G++ V L KE +M+L+ + V ALL Q+L + Sbjct: 347 SPPHKCEIFWTENAHKLNDNRQELLKMLITMLEKSNDPLVLCVAANDIGEFVRYYPRGKMHVEQLGGKEALMRLLTVPDPNVRYFALLAAQKLMV 441
BLAST of DN617385 vs. ExPASy Swiss-Prot
Match: VATH_DICDI (V-type proton ATPase subunit H OS=Dictyostelium discoideum GN=vatH PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.757e-13 Identity = 37/96 (38.54%), Postives = 60/96 (62.50%), Query Frame = -3 Query: 281 SPMHKDPLFWRDNITNFEENDFQILRVLLTILDTS-SDPRALAVACFDLSQFIQYHPAGRVIVTDLKAKERVMKLMNHENTEVTKSALLCIQRLFL 565 +P+HK FW++NI+ FEEN++Q+++ L IL TS S P L++AC DL +F+++H G+ I+T + + R N EV AL +Q++ L Sbjct: 342 TPVHKSERFWKENISKFEENNYQVIKHLHQILKTSQSTPLQLSIACHDLCEFVRHHSRGKAIMT-ITNQTRYHGYDVKSNEEVKNQALFALQKMML 436
BLAST of DN617385 vs. ExPASy Swiss-Prot
Match: VATH_SCHPO (V-type proton ATPase subunit H OS=Schizosaccharomyces pombe GN=vma13 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.323e-12 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = -3 Query: 287 SPMHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIVTDLKAKERVMKLMNHENTEVTKSALLCIQRL 565 SP H+ FW N E+++ +L+ L I+ + D +LAVAC DL +I+ +P GR ++ AK+R+M LM+H + EV AL +Q L Sbjct: 346 SPSHRSEDFWHQNAKRLNEDNYALLKKLFHIVQYNEDNTSLAVACHDLGAYIRSYPEGRSLIIKYGAKQRIMDLMSHPDPEVRFEALSTVQLL 438 The following BLAST results are available for this feature:
BLAST of DN617385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617385 ID=DN617385; Name=DN617385; organism=Citrus sinensis; type=EST; length=567bpback to top |