DN617358

Overview
NameDN617358
Unique NameDN617358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length354
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_HAEIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.752e-18
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 3 
Query:   42 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 338
            SHI+G+PR+G KRELKFA E +W  + + +DL  ++  LR   WK  + A   ++    F++YD +LD     GA+P R+ ++   +  D YF +ARGN
Sbjct:    4 SHILGFPRVGAKRELKFAQERYWRKELAEQDLLDLAKALREKNWKHQAAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLTLDQYFQLARGN 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_HAEIG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittGG) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.752e-18
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 3 
Query:   42 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 338
            SHI+G+PR+G KRELKFA E +W  + + +DL  ++  LR   WK  + A   ++    F++YD +LD     GA+P R+ ++   +  D YF +ARGN
Sbjct:    4 SHILGFPRVGAKRELKFAQERYWRKELAEQDLLDLAKALREKNWKHQAAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLTLDQYFQLARGN 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_HAEIE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittEE) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.752e-18
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 3 
Query:   42 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 338
            SHI+G+PR+G KRELKFA E +W  + + +DL  ++  LR   WK  + A   ++    F++YD +LD     GA+P R+ ++   +  D YF +ARGN
Sbjct:    4 SHILGFPRVGAKRELKFAQERYWRKELAEQDLLDLAKALREKNWKHQAAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLTLDQYFQLARGN 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_BIFA0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.752e-18
Identity = 42/96 (43.75%), Postives = 62/96 (64.58%), Query Frame = 3 
Query:   48 IVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            I G+PR+G  RELK A+E++W G ++ +D+++   +LR   W+   +AGI  IPSN FS YDQ+LDT  +L  +P RY   G +   +  F+MARG
Sbjct:    7 ISGFPRIGRDRELKKAIEAYWKGNATLDDVRETGRELRVRHWRLEKDAGIDLIPSNDFSLYDQMLDTAVLLNVIPARYRRLGFDNPEETLFAMARG 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_VIBVU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus GN=metE PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.401e-18
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 3 
Query:   42 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 341
            +HI+GYPR+G KRELKFA E +W G+    +L+KV A+LR   W+  + AG+ +  +  F++YD VL TT +LG VP R+    G    D  F + RG +
Sbjct:    5 THILGYPRIGEKRELKFAQEKYWRGEIDQAELKKVGAELRHKNWQTQASAGLSFAVAGDFAWYDHVLTTTLLLGHVPKRH--RHGFPDLDTLFRVGRGQS 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_HAES1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus somnus (strain 129Pt) GN=metE PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.401e-18
Identity = 37/98 (37.76%), Postives = 60/98 (61.22%), Query Frame = 3 
Query:   45 HIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 338
            H++G+PR+G KRELKFA E +W  + + +DL  ++  LR   WK  ++A   ++    F++YD +LD     GA+P R+ ++   +  D YF +ARGN
Sbjct:    5 HVLGFPRVGAKRELKFAQERYWRKELAEQDLLDLAKALREKNWKHQADANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSKNLTLDQYFQLARGN 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_DESVH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metE PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.401e-18
Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = 3 
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIG-------FDVYFSMARGNASV 347
            M +H +G+PR+G  RELK A+E +W G+ S   L+  +A LR+  W    +AGI  +P   F+ YD +LD T MLGA+PPR++ +G            D+ F MARG A +
Sbjct:    1 MRTHNLGFPRIGAGRELKKAVEGYWKGRVSRHALEGEAARLRACHWAMQRDAGIDVVPVGDFALYDHMLDLTLMLGAIPPRFSPSGAAASPAGTGQDIDLMFRMARGEAGL 111
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_VIBVY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus (strain YJ016) GN=metE PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.360e-18
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 3 
Query:   42 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 341
            +HI+GYPR+G KRELKFA E +W G+    +L+KV A+LR   W+  + AG+ +  +  F++YD VL TT +LG VP R+    G    D  F + RG +
Sbjct:    5 THILGYPRIGEKRELKFAQEKYWRGEIDQAELKKVGAELRYKNWQTQASAGLSFAVAGDFAWYDHVLTTTLLLGHVPKRH--RHGFPDLDTLFRVGRGQS 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_VIBHB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metE PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.360e-18
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 3 
Query:   42 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 341
            +HI+GYPR+G KRELKFALE +W G+    +L+++ A LR   W   +EAG+ +  +  F++YD VL TT +LG  P R+    G    D  F + RG +
Sbjct:    5 THILGYPRIGEKRELKFALEKYWRGEIDQAELKQLGAGLREKNWNTQTEAGLSFATAGDFAWYDHVLTTTLLLGHTPKRH--ANGFPDLDTLFKVGRGQS 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_CAMJD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=metE PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.360e-18
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 3 
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            M + I+ YPR+G  RELKFA+E ++  +SS E+L + + +LR+  WK +  AGI +IPSN FS YD VLDT  +   V  +Y  N      D YF+ +RG
Sbjct:    1 MKNSIISYPRIGANRELKFAIEKYFKAQSSKEELLETAKNLRARHWKDIQNAGIDFIPSNDFSLYDNVLDTAVLFNIVHTKYK-NLNLDALDEYFAQSRG 99
The following BLAST results are available for this feature:
BLAST of DN617358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
METE_HAEIN3.752e-1839.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIG3.752e-1839.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIE3.752e-1839.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFA03.752e-1843.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBVU6.401e-1843.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAES16.401e-1837.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESVH6.401e-1840.545-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBVY8.360e-1843.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHB8.360e-1842.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJD8.360e-1844.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01B15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617358 ID=DN617358; Name=DN617358; organism=Citrus sinensis; type=EST; length=354bp
CTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCATCTCACATC
GTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTCGCGTTGGA
ATCCTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAAAAGGTGTCCG
CTGATCTCAGATCCTCCATCTGGAAACAGATGTCCGAGGCCGGGATCAAA
TACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTCGACACCAC
CGCAATGCTCGGTGCCGTGCCACCTAGGTATAACTGGAACGGCGGCGAGA
TTGGATTCGATGTTTACTTCTCCATGGCCAGAGGAAACGCCTCTGTTCCC
GCTA
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