DN617358

Overview
NameDN617358
Unique NameDN617358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length354
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_CAMJJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 3 
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            M + I+ YPR+G  RELKFA+E ++  +SS E+L K + DLR   W+++ +AGI +IPSN FS YD VLD   +   V  +Y  N      D YF+ +RG
Sbjct:    1 MKNSIISYPRIGANRELKFAIEKYFKNQSSKEELLKSAKDLRIRHWQEIQKAGIDFIPSNDFSLYDNVLDAAVLFNIVHTKYK-NLNLDALDEYFAQSRG 99
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_CAMJE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 3 
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            M + I+ YPR+G  RELKFA+E ++  +SS E+L K + DLR   W+++ +AGI +IPSN FS YD VLD   +   V  +Y  N      D YF+ +RG
Sbjct:    1 MKNSIISYPRIGANRELKFAIEKYFKNQSSKEELLKSAKDLRIRHWQEIQKAGIDFIPSNDFSLYDNVLDAAVLFNIVHTKYK-NLNLDALDEYFAQSRG 99
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_CAMJ8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 3 
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            M + I+ YPR+G  RELKFA+E ++  +SS E+L K + DLR   W+++ +AGI +IPSN FS YD VLD   +   V  +Y  N      D YF+ +RG
Sbjct:    1 MKNSIISYPRIGANRELKFAIEKYFKNQSSKEELLKSAKDLRIRHWQEIQKAGIDFIPSNDFSLYDNVLDAAVLFNIVHTKYK-NLNLDALDEYFAQSRG 99
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_BUCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17
Identity = 45/104 (43.27%), Postives = 59/104 (56.73%), Query Frame = 3 
Query:   42 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNASVPA 353
            +H +G+PR+G  RELK A E +W  K S E+L  V   LR   W+Q  E GI YIP   FS+YD VL T+ +LG +P R+      +  D  F +ARG A   A
Sbjct:    4 NHTLGFPRIGLFRELKVAQEKYWSRKISKEELFSVGKTLRVRHWQQQKELGINYIPVGDFSWYDHVLGTSMLLGNIPKRHKNGNDLVTLDTLFRVARGVAPTGA 107
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_BIFLO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 3 
Query:   48 IVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            + G+PR+G  RELK  +E +W G +    ++  +A+LR+  WK    AGI  IPSN FSYYDQ+LDT  +L  +P RY     +   D  F+MARG
Sbjct:    7 VSGFPRIGQNRELKKIIEGYWKGANDLAAVKATAAELRAKHWKLQQAAGIDLIPSNDFSYYDQMLDTAILLNVIPQRYARLSFDNQEDTLFAMARG 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_BIFLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 3 
Query:   48 IVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            + G+PR+G  RELK  +E +W G +    ++  +A+LR+  WK    AGI  IPSN FSYYDQ+LDT  +L  +P RY     +   D  F+MARG
Sbjct:    7 VSGFPRIGQNRELKKIIEGYWKGANDLAAVKATAAELRAKHWKLQQAAGIDLIPSNDFSYYDQMLDTAILLNVIPQRYARLSFDNQEDTLFAMARG 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_VIBHA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.432e-17
Identity = 42/100 (42.00%), Postives = 60/100 (60.00%), Query Frame = 3 
Query:   42 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 341
            +HI+GYPR+G KRELKFA E +W G+    +L++V A LR   W   +EAG+ +  +  F++YD VL TT +LG  P R+    G    D  F + RG +
Sbjct:    5 THILGYPRIGEKRELKFAQEKYWRGEIEQTELKQVGATLREKNWATQAEAGLSFATAGDFAWYDHVLTTTLLLGHTPKRH--ANGFPDLDTLFKVGRGQS 102
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_COREF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium efficiens GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.432e-17
Identity = 48/111 (43.24%), Postives = 64/111 (57.66%), Query Frame = 3 
Query:   39 ASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYN------WNGGEIGFDVYFSMARGNASVPA 353
            +S I G PR+G  RELKFALE FW G  S  +L + +  L +    Q++ AG+  IP+   SYYD +LDTTA+LG  P R+        +G     D YF+ ARG A +PA
Sbjct:    6 SSTIAGVPRIGAHRELKFALEGFWSGTVSGRELGQTATTLTNDYCDQLAAAGLDSIPTAGRSYYDAMLDTTALLGVFPERFQNLDDHPNDGLPAHIDRYFATARGTAELPA 116
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_XYLFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M12) GN=metE PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.177e-17
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 3 
Query:   51 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            +G+PR+G +RELK ALES W G++ A  LQ  + +LR+  W+   +AG+   PSN FS YD VLDT  +  A+P RY+          YF+MARG
Sbjct:    7 LGFPRIGARRELKRALESHWRGETDATQLQHTARELRARHWRLQRDAGVDLPPSNDFSLYDHVLDTAFLFDAIPQRYHGLVDADPLAGYFAMARG 101
[Close]
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_BLOPB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia pennsylvanicus (strain BPEN) GN=metE PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.177e-17
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 3 
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            +  HI+G+PR+G  RELK+ALE +WDGK   + L ++   LR   WKQ  ++GI +I    F++YD VL T+ ML  +P R+      I  +  F ++RG
Sbjct:    3 IVGHILGFPRIGLHRELKYALEYYWDGKIKEDKLLEIGRTLRIRHWKQQKDSGIDWISVGDFAWYDHVLTTSLMLNNIPDRHRIGQENINLNTLFRISRG 102
The following BLAST results are available for this feature:
BLAST of DN617358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
METE_CAMJJ1.426e-1744.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJE1.426e-1744.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJ81.426e-1744.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCBP1.426e-1743.275-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLO1.426e-1743.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLD1.426e-1743.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHA2.432e-1742.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COREF2.432e-1743.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFM3.177e-1745.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOPB3.177e-1740.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01B15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617358 ID=DN617358; Name=DN617358; organism=Citrus sinensis; type=EST; length=354bp
CTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCATCTCACATC
GTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTCGCGTTGGA
ATCCTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAAAAGGTGTCCG
CTGATCTCAGATCCTCCATCTGGAAACAGATGTCCGAGGCCGGGATCAAA
TACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTCGACACCAC
CGCAATGCTCGGTGCCGTGCCACCTAGGTATAACTGGAACGGCGGCGAGA
TTGGATTCGATGTTTACTTCTCCATGGCCAGAGGAAACGCCTCTGTTCCC
GCTA
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