DN617358

Overview
NameDN617358
Unique NameDN617358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length354
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_STRSY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus suis (strain 05ZYH33) GN=metE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.287e-14
Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            M + I+G+PR+G  RELKF  E ++  +   E+L + + DLR+  W  + EAGI  IPSN FS+YD VLD   +   +P     +      + YF++ARG
Sbjct:    1 MTTTIIGFPRIGEHRELKFITEKYFRNEIPQEELLEAAKDLRAKHWNIVKEAGITEIPSNDFSHYDNVLDAAVLFNIIPKAVQ-DLELTDLEKYFALARG 99          
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_STRGC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.287e-14
Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 3
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEI-GFDVYFSMARG 335
            M++ I+G+PR+G  RELKF  E ++  + SA++L   + +LR+  W  + E GI  IPSN FS+YD VLD   +   VP   +  G E+   + YF++ARG
Sbjct:    1 MSTTIIGFPRLGEFRELKFTTEKYFRKEISADELLAAAKELRAKHWNIVKEKGISEIPSNDFSHYDNVLDAAFLFNVVPS--SVRGLELTDLERYFALARG 99          
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_CORGL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum GN=metE PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.293e-14
Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 3
Query:   39 ASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYN------WNGGEIGFDVYFSMARGNASVPA 353
            +S + G PR+G KRELKFALE +W+G     +L + +  L ++    +S  G+  +P    SYYD +LDT A+LG +P R++       +G  +  D YF  ARG  ++PA
Sbjct:    6 SSTVAGLPRIGAKRELKFALEGYWNGSIEGRELAQTARQLVNTASDSLS--GLDSVPFAGRSYYDAMLDTAAILGVLPERFDDIADHENDGLPLWIDRYFGAARGTETLPA 114          
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_CORGB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum (strain R) GN=metE PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.293e-14
Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 3
Query:   39 ASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYN------WNGGEIGFDVYFSMARGNASVPA 353
            +S + G PR+G KRELKFALE +W+G     +L + +  L ++    +S  G+  +P    SYYD +LDT A+LG +P R++       +G  +  D YF  ARG  ++PA
Sbjct:    6 SSTVAGLPRIGAKRELKFALEGYWNGSIEGRELAQTARQLVNTASDSLS--GLDSVPFAGRSYYDAMLDTAAILGVLPERFDDIADHENDGLPLWIDRYFGAARGTETLPA 114          
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_STRTD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=metE PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.607e-14
Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            M++ I+G+PR+G  RELKF  E ++  + +A++L   + DLR+  W  + E GI  IPSN FS+YD  LD   +   VP     N      + YF++ARG
Sbjct:    1 MSTTIIGFPRLGEFRELKFTTEKYFRNEITADELLAAAKDLRAKHWNIVKEKGITEIPSNDFSHYDNFLDAAFLFNVVPESVK-NLDLTELEQYFALARG 99          
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_BACHD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus halodurans GN=metE PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.607e-14
Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 3
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNASVPA 353
            M +  +GYPR+G  RE K ALESFW   ++ E L     +LR +  +   E  +  IP   F+ YD VLD   M G +P R+   G       YF+MARG+ +  A
Sbjct:    1 MLTSNLGYPRIGENREWKKALESFWANDTTEEQLLATMKELRLNHLRVQQEQEVDLIPVGDFTLYDHVLDMAVMFGIIPKRFLQQGDTPTLSTYFAMARGSKNAQA 106          
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_RUTMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=metE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.323e-14
Identity = 38/101 (37.62%), Postives = 60/101 (59.41%), Query Frame = 3
Query:   45 HIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNASV 347
            H +G+PR+G  RELKFALE +W    S ++L + ++ L    W+  ++  + ++P   FS+YD VLD + +LG +P R   N  +   D YF +ARG A +
Sbjct:    5 HNLGFPRIGRHRELKFALEKYWSNAISQDELLQTASTLCKQYWQNQNK--LDWVPVGDFSFYDHVLDMSFLLGNIPKRAE-NLSDNELDNYFRVARGRAFI 102          
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_STRMU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus mutans GN=metE PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.565e-14
Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 3
Query:   51 VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 338
            +GYPR+G  RE K  +E++W GK S  DL   + +LR    K+   AG+  IP   FS YD +LD +     +P R+      I  D+YF++ARGN
Sbjct:    7 LGYPRLGENREWKKLIEAYWAGKVSKNDLFAGAKELRLDFLKKQLNAGLDLIPVGDFSLYDHILDLSVQFNIIPKRFAKE--PIDIDLYFAIARGN 100          
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_BACCN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=metE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.249e-13
Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 3
Query:   36 MASHI--VGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGN 338
            MA H   +GYPR+G +RE K  LE+FW  K   + L     ++         E GI +IP   F+YYD VLDT  MLG +P R+  +      D+YF+MARG+
Sbjct:    1 MALHTSNLGYPRIGLQREWKKTLEAFWAQKIDEQQLITTMKEIHLEHLNVQKEKGIDFIPIGDFTYYDHVLDTAYMLGFIPSRF--SNFTSYLDIYFAMARGS 101          
BLAST of DN617358 vs. ExPASy Swiss-Prot
Match: METE_STRPI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.131e-13
Identity = 40/100 (40.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:   36 MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 335
            M++ IVG+PR+G  RELKF  E ++  + S E+L   + DLR+  W  + E GI  IPSN FS+YD  LD   +   VP     N      + YF++ RG
Sbjct:    1 MSTTIVGFPRLGEFRELKFTTEKYFRKEISEEELLAAAKDLRAKHWNIVKEKGITEIPSNDFSHYDNFLDAAFLFNVVPASVQ-NLDLSDLERYFALGRG 99          
The following BLAST results are available for this feature:
BLAST of DN617358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
METE_STRSY3.287e-1439.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGC3.287e-1440.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGL4.293e-1437.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGB4.293e-1437.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRTD5.607e-1439.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACHD5.607e-1437.745-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RUTMC7.323e-1437.625-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRMU9.565e-1439.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACCN1.249e-1340.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPI2.131e-1340.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01B15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617358 ID=DN617358; Name=DN617358; organism=Citrus sinensis; type=EST; length=354bp
CTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCATCTCACATC
GTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTCGCGTTGGA
ATCCTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAAAAGGTGTCCG
CTGATCTCAGATCCTCCATCTGGAAACAGATGTCCGAGGCCGGGATCAAA
TACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTCGACACCAC
CGCAATGCTCGGTGCCGTGCCACCTAGGTATAACTGGAACGGCGGCGAGA
TTGGATTCGATGTTTACTTCTCCATGGCCAGAGGAAACGCCTCTGTTCCC
GCTA
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