DN617351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617351 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 4.645e-52 Identity = 96/151 (63.58%), Postives = 121/151 (80.13%), Query Frame = -1 Query: 192 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG------GQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 626 KTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G + T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SKFGHGRFQT +EK+ + G +K Sbjct: 243 KTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
BLAST of DN617351 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 6.066e-52 Identity = 96/151 (63.58%), Postives = 121/151 (80.13%), Query Frame = -1 Query: 192 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG------GQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 626 KTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G + T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SKFGHGRFQT +EK+ + G +K Sbjct: 243 KTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of DN617351 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 7.923e-52 Identity = 92/148 (62.16%), Postives = 120/148 (81.08%), Query Frame = -1 Query: 192 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 626 KTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N K+Y++GK + + G TEFD T+K I PMGGFP YG+V DY+M++G +GPKKR++TLR+SL+ QT R+A E+I +K+IDTSSK GHGRFQTT EK+ + G++K Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
BLAST of DN617351 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3) HSP 1 Score: 202.216 bits (513), Expect = 1.765e-51 Identity = 94/151 (62.25%), Postives = 117/151 (77.48%), Query Frame = -1 Query: 192 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES------HTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 626 KTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G + T +D T+K ITP+GGFPHYG V +D++M+KGC G KKRV+TLR+SLL SR ALE I++KFIDT+SKFGHGRFQT QEK+ + G K Sbjct: 243 KTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVVKNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of DN617351 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 200.29 bits (508), Expect = 6.707e-51 Identity = 93/145 (64.14%), Postives = 116/145 (80.00%), Query Frame = -1 Query: 192 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 626 KTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GKG E++ G T FDRT+K ITPMGGF HYG +K+D++M+KGC G +KR+VTLR+SL TSR ALEE+ +K+IDT+SKFG GRFQT EK + G +K Sbjct: 241 KTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEAN-GATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
BLAST of DN617351 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3) HSP 1 Score: 199.134 bits (505), Expect = 1.494e-50 Identity = 92/151 (60.93%), Postives = 116/151 (76.82%), Query Frame = -1 Query: 192 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES------HTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 626 KTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK++++G+G + T +D T K ITP+GGFPHYG V +D++M+KGC G KKRV+TLR+SLL SR A+E I++KFIDT+SKFGHGRFQT QEK+ + G K Sbjct: 243 KTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of DN617351 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3) HSP 1 Score: 198.364 bits (503), Expect = 2.549e-50 Identity = 95/151 (62.91%), Postives = 120/151 (79.47%), Query Frame = -1 Query: 192 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG------GQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 626 KTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G + T++D ++K I P+GGF HYG V +D++M+KGC VG KKRV+TLR+SLL QT R ALE+I +KFIDT+SKFGHGRFQT +EK+ + G +K Sbjct: 243 KTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of DN617351 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.678e-50 Identity = 93/145 (64.14%), Postives = 115/145 (79.31%), Query Frame = -1 Query: 192 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 626 KTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KVY++GKG E++ TEFDRT+K ITPMGGF HYG + +D++++KG G +KRVVTLR+SL TSR ALEE+ +K+IDT+SKFG GRFQT EK + G +K Sbjct: 241 KTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAA-TEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384
BLAST of DN617351 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.158e-49 Identity = 92/145 (63.45%), Postives = 113/145 (77.93%), Query Frame = -1 Query: 192 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 626 KTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y++GKG E + T FDRT+K I PMGGF HYG+V +D++M+KG G KKRVVTLR+SL TSR A+EE+ +K+IDT+SKFG GRFQT EK + G +K Sbjct: 241 KTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGKGDDEGNAA-TNFDRTKKTINPMGGFVHYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
BLAST of DN617351 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.680e-49 Identity = 92/145 (63.45%), Postives = 113/145 (77.93%), Query Frame = -1 Query: 192 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFGHGRFQTTQEKQKYYGRMK 626 KTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N KVY++G G ES +G TEFDRT+K I PMGGF YG VK+D++++KG G KKR+VT+R+SL TSR A E + +K+IDT+SKFG GRFQT EK + G +K Sbjct: 241 KTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDES-SGATEFDRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384 The following BLAST results are available for this feature:
BLAST of DN617351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617351 ID=DN617351; Name=DN617351; organism=Citrus sinensis; type=EST; length=626bpback to top |