DN617346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617346 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.029e-34 Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 111 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN----DPKWCLPG----TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGI 524 A G W +A ATFY YGN Y QGYGT+TAALS +F +GLSCG+C+E++C D + CLP +I+VTAT+ C GGWCNPP HFDLSQP F IA++++G+VPV+YRRV C R+GG+ Sbjct: 24 AAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGM 169
BLAST of DN617346 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 1.755e-34 Identity = 67/134 (50.00%), Postives = 85/134 (63.43%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGI 524 W +A ATFY YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C + +WC GT + VTATN+C GGWCNPP++HFD+SQP ++ IA Y +G+VPV Y R PC R GGI Sbjct: 27 WTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGI 160
BLAST of DN617346 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 2.994e-34 Identity = 69/135 (51.11%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGI 524 W A ATFY YGNLY QGYG + AALS ALFN+G SCG CY I C P+WC GT + VTATN C GGWCNPP+ HFD+SQP ++ I Y+AG+VPV Y+RV C R+GG+ Sbjct: 28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGV 162
BLAST of DN617346 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.138e-33 Identity = 64/134 (47.76%), Postives = 81/134 (60.45%), Query Frame = 3 Query: 123 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGI 524 G W A ATFY YGNL++ GYG +TAALST LFN+G CG C++I C P + +VTATN C GGWCNPP+ HFD+++P F +A +RAG++PVAYRRVPC R GG+ Sbjct: 35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGM 168
BLAST of DN617346 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.535e-33 Identity = 69/136 (50.74%), Postives = 83/136 (61.03%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGG--WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGI 524 W A ATFY YGNLY+ GYGT+TAALST LF +G CG+CY+++CV C G+ I VTATN C GG WCNPP+ HFDLS+P F +A +RAG+VPV YRRVPC R GG+ Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGL 171
BLAST of DN617346 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 2.535e-33 Identity = 65/136 (47.79%), Postives = 82/136 (60.29%), Query Frame = 3 Query: 126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGI 524 GW ATFY YGNLY+ GYGTNTAALS+ LFN+G SCG CY I C P+WC G + +TATN C GGWCNPP+ HFD+++P + I Y+AG++PV Y++V C R+GGI Sbjct: 26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGI 161
BLAST of DN617346 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.647e-33 Identity = 68/145 (46.90%), Postives = 83/145 (57.24%), Query Frame = 3 Query: 108 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGI 524 H N G G W A ATFY Y + +GYG T A+ST LF G CG+CYE+KCV+ P C G ++VTATN C GGWCNPP++HFDLS P F IAQ +AG+VP++YRRVPC + GGI Sbjct: 31 HRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGI 175
BLAST of DN617346 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.647e-33 Identity = 66/137 (48.18%), Postives = 83/137 (60.58%), Query Frame = 3 Query: 120 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGI 524 G W A ATFY YGN+Y GYG T ALSTALFN G +CG C+++KCV+ P C G+ +VTATN C GGWCNPP+ HFDL++P F IA ++AG++PV+YRRV C + GGI Sbjct: 28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGI 163
BLAST of DN617346 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 3.099e-31 Identity = 68/136 (50.00%), Postives = 79/136 (58.09%), Query Frame = 3 Query: 126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGI 524 GW+ ATFY YGNLY QGYG N AALST LFNNG SCG CY I C D P C GT I VT TNFC GGWCN + HFD+SQP +++I Y AG+VP+ Y++V C R GG+ Sbjct: 22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFC--PPNYDLPYGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGV 155
BLAST of DN617346 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.221e-29 Identity = 63/135 (46.67%), Postives = 77/135 (57.04%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGI 524 W+ ATFY YGNLY QGYG N AALST LFN+G SCG CY I C P WC G I VT TN+C GGWCN + HFD+SQP +++I Y AG++P+ Y++V C R GG+ Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYC--PPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGV 155 The following BLAST results are available for this feature:
BLAST of DN617346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617346 ID=DN617346; Name=DN617346; organism=Citrus sinensis; type=EST; length=524bpback to top |