DN617342

Overview
NameDN617342
Unique NameDN617342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length487
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6287 contig Csv1_Contig6287:87..573. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.471e-18
Identity = 41/75 (54.67%), Postives = 58/75 (77.33%), Query Frame = 1
Query:  262 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            P+ N++D+ YFGEI IG+PPQNF V+FDTGSSNLWVPS+ C  S +C  H+R+   +S+T+T  G++  ++YGSG
Sbjct:   66 PITNYLDSFYFGEISIGTPPQNFLVLFDTGSSNLWVPSTYCQ-SQACSNHNRFSPSQSSTFTNGGQTYTLSYGSG 139          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.921e-18
Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 1
Query:  262 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            PL N++D +YFG+I IG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+RY+  +S TY   G++  I YG+G
Sbjct:   65 PLMNYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYC-TSQACTKHNRYRPSESTTYVSNGEAFFIQYGTG 138          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.921e-18
Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 1
Query:  262 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            PL N++D +YFG I IGSPPQNF+VIFDT SSNLWVPS  C  S +C  H +++  +SNTY+E+G    I YG+G
Sbjct:   69 PLINYLDMEYFGTISIGSPPQNFTVIFDTVSSNLWVPSVYC-TSPACQMHPQFRPSQSNTYSEVGTPFSIAYGTG 142          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPC_CALJA (Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.509e-18
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 1
Query:  229 HRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +R+ D      P+ ++MDA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  S +C  HSR+    S+TY+  G++  + YGSG
Sbjct:   54 YRVSDLSVSYEPM-DYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSASSTYSSNGQTFSLQYGSG 137          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.509e-18
Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 1
Query:  184 RKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +K++Y    GVS  +   G+     +PL N++D+QYFG+I +G+PPQ F+V+FDTGSS+ WVPS  C  S +C  H R+  RKS+T+  +GK   I YG+G
Sbjct:   45 QKQQY----GVSSEYSGFGEVAS--VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIRYGTG 138          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 2.509e-18
Identity = 45/101 (44.55%), Postives = 68/101 (67.33%), Query Frame = 1
Query:  184 RKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +K++Y    G+S  +   G+     +PL N++D+QYFG+I +G+PPQ F+V+FDTGSS+ WVPS  C  S +C  H R+  RKS+T+  +GK   I+YG+G
Sbjct:   45 QKQQY----GISSKYSGFGEVAS--VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTG 138          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPC_MACFU (Gastricsin (Fragment) OS=Macaca fuscata fuscata GN=PGC PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 3.277e-18
Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = 1
Query:  229 HRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +  GD      P+  +MDA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  S +C  HSR+   +S+TY+  G++  + YGSG
Sbjct:   43 YHFGDLSVSYEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSG 126          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.277e-18
Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 1
Query:  262 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            PL N++D +YFG I IG+PPQNF+VIFDTGSSNLWVPS  C  S +C  H  +   +S+TYTE+G    I YG+G
Sbjct:   70 PLINYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYC-TSPACKAHPVFHPSQSDTYTEVGNHFSIQYGTG 143          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.277e-18
Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query:  262 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            PL N++D +YFG I IGSPPQNF+VIFDTGSSNLWVPS  C  S +C  H  +    S+TY E+G S  I YG+G
Sbjct:   65 PLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-TSPACQTHPVFHPSLSSTYREVGNSFSIQYGTG 138          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 4.280e-18
Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            L N++D QY+GEIGIG+P Q F VIFDTGS+NLWVPS+KC     +C  H+ Y S +S++Y E G    I+YGSG
Sbjct:   76 LTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCGPLYTACEIHNLYDSSESSSYMENGTEFTIHYGSG 150          
The following BLAST results are available for this feature:
BLAST of DN617342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
PEPC_MONDO1.471e-1854.67Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
CATE_RANCA1.921e-1856.00Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
CATE_RABIT1.921e-1857.33Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]
PEPC_CALJA2.509e-1852.33Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1[more]
CHYM_SHEEP2.509e-1845.54Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]
CHYM_BOVIN2.509e-1844.55Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]
PEPC_MACFU3.277e-1852.33Gastricsin (Fragment) OS=Macaca fuscata fuscata GN... [more]
CATE_MOUSE3.277e-1857.33Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]
CATE_CAVPO3.277e-1858.67Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
RENI_RAT4.280e-1856.00Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01B07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617342 ID=DN617342; Name=DN617342; organism=Citrus sinensis; type=EST; length=487bp
TTCAAACTCAGCTTCAGCAGAAAACCAAAGAACATCATGGAGCAGAAACT
TCTTCGGTCAGTTTTCTGTTTATGGGTGCTAGCGTCGTGCTTGCTTCTTC
CTGCTTCCTCTAATGGCTTACGGAGAATTGGCTTGAAGAAGCGGCGTCTA
GATCTTCATAGTCTAAATGCTGCAAGAATAACAAGAAAAGAGCGATATAT
GGGGGGAGCAGGTGTTAGTGGCGTGCACCATCGTTTGGGTGATTCAGATG
AAGATATTTTGCCTTTGAAGAACTTTATGGATGCTCAATACTTTGGAGAG
ATTGGTATTGGCTCTCCCCCACAAAATTTCAGTGTCATATTTGATACCGG
CAGTTCCAATCTCTGGGTTCCATCTTCAAAGTGCTATTTCTCTATTTCCT
GCTATTTCCATTCGAGGTACAAGTCCAGAAAATCCAATACATATACCGAA
ATGGGAAAATCCTGTGAAATAAACTATGGATCTGGAT
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