DN617342

Overview
NameDN617342
Unique NameDN617342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length487
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6287 contig Csv1_Contig6287:87..573. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 4.280e-18
Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 1
Query:  262 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            PL N+MD +YFG IGIG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+R+  +KS+T+    ++  I YG+G
Sbjct:   66 PLVNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQKSSTFQSTSQTLSIAYGTG 139          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPA4_RABIT (Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.280e-18
Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            L+N++DA+YFG I IG+PPQ+F+VIFDTGSSNLWVPS+ C  S++C  H R+    S+TY    ++  I YG+G
Sbjct:   67 LENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYC-SSLACALHKRFNPEDSSTYQGTSETLSITYGTG 139          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.590e-18
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 1
Query:  262 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            PL+N+MD +YFG IGIG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+R+  ++S+TY    +   + YG+G
Sbjct:   65 PLENYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQQSSTYQGTNQKLSVAYGTG 138          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.590e-18
Identity = 39/74 (52.70%), Postives = 55/74 (74.32%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            L+N++DA+YFG I IG+PPQ F+VIFDTGSSNLWVPS+ C  S++C+ H R+    S+T+    ++  I YG+G
Sbjct:   67 LENYLDAEYFGTISIGTPPQEFTVIFDTGSSNLWVPSTYC-SSLACFLHKRFNPDDSSTFQATSETLSITYGTG 139          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.301e-18
Identity = 39/74 (52.70%), Postives = 55/74 (74.32%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            ++N++DA+YFG I IG+PPQ+F+VIFDTGSSNLWVPS+ C  S++C  H R+    S+TY    ++  I YG+G
Sbjct:   67 MENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYC-SSLACALHKRFNPEDSSTYQGTSETLSITYGTG 139          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.301e-18
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            L N++D QYFG+I IG+PPQ F+V+FDTGSS+LWVPS  C  S++C  H R+   KS+T+  M KS  I YG+G
Sbjct:   66 LTNYLDCQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSVYCN-SVACQNHHRFDPSKSSTFQNMDKSLSIQYGTG 138          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CARP_YEAST (Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.301e-18
Identity = 39/76 (51.32%), Postives = 56/76 (73.68%), Query Frame = 1
Query:  259 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +PL N+++AQY+ +I +G+PPQNF VI DTGSSNLWVPS++C  S++C+ HS+Y    S++Y   G    I YG+G
Sbjct:   81 VPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNEC-GSLACFLHSKYDHEASSSYKANGTEFAIQYGTG 155          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 7.301e-18
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            L ++ +AQY+G + IG+PPQNF V+FDTGSSNLWVP + C F  I+C  H+R+  +KS++ T  G S EI YG+G
Sbjct:   61 LSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGASFEIQYGTG 135          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 1
Query:  274 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +MDA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  S +C  H+R+   +S+TY+  G++  + YGSG
Sbjct:   68 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPNQSSTYSTNGQTFSLQYGSG 137          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18
Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 1
Query:  253 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            D  PL+N++D +YFG IGIG+P Q+F+V+FDTGSSNLWVPS  C  S++C  H+R+    S+TY    ++  I YG+G
Sbjct:   64 DEQPLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYC-SSLACTNHNRFNPEDSSTYQSTSETVSITYGTG 140          
The following BLAST results are available for this feature:
BLAST of DN617342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
PEPA_SUNMU4.280e-1856.00Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PEPA4_RABIT4.280e-1854.05Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA_RHIFE5.590e-1854.67Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
PEPA1_RABIT5.590e-1852.70Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA2_RABIT7.301e-1852.70Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
CHYM_CALJA7.301e-1855.41Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]
CARP_YEAST7.301e-1851.32Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4... [more]
ASP3_CAEEL7.301e-1853.33Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
PEPC_SUNMU9.536e-1857.75Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]
PEPA_HUMAN9.536e-1851.28Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01B07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617342 ID=DN617342; Name=DN617342; organism=Citrus sinensis; type=EST; length=487bp
TTCAAACTCAGCTTCAGCAGAAAACCAAAGAACATCATGGAGCAGAAACT
TCTTCGGTCAGTTTTCTGTTTATGGGTGCTAGCGTCGTGCTTGCTTCTTC
CTGCTTCCTCTAATGGCTTACGGAGAATTGGCTTGAAGAAGCGGCGTCTA
GATCTTCATAGTCTAAATGCTGCAAGAATAACAAGAAAAGAGCGATATAT
GGGGGGAGCAGGTGTTAGTGGCGTGCACCATCGTTTGGGTGATTCAGATG
AAGATATTTTGCCTTTGAAGAACTTTATGGATGCTCAATACTTTGGAGAG
ATTGGTATTGGCTCTCCCCCACAAAATTTCAGTGTCATATTTGATACCGG
CAGTTCCAATCTCTGGGTTCCATCTTCAAAGTGCTATTTCTCTATTTCCT
GCTATTTCCATTCGAGGTACAAGTCCAGAAAATCCAATACATATACCGAA
ATGGGAAAATCCTGTGAAATAAACTATGGATCTGGAT
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