DN617342

Overview
NameDN617342
Unique NameDN617342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length487
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6287 contig Csv1_Contig6287:87..573. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18
Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            LKN+MD +YFG IGIG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+R+  ++S+TY    +   I YG+G
Sbjct:   66 LKNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQESSTYQGTNRPVSIAYGTG 138          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.245e-17
Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 1
Query:  235 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            LG++   ++ L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G
Sbjct:   69 LGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTG 152          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: RENI_MACMU (Renin OS=Macaca mulatta GN=REN PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.245e-17
Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 1
Query:  235 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            LG++   ++ L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G
Sbjct:   69 LGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTG 152          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: RENI_MACFA (Renin OS=Macaca fascicularis GN=REN PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.245e-17
Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 1
Query:  235 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            LG++   ++ L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G
Sbjct:   69 LGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTG 152          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.245e-17
Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 1
Query:  235 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            LG++   ++ L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G
Sbjct:   69 LGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTG 152          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.245e-17
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 1
Query:  274 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            ++DA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  S +C  H+R+   KS+TY+  G++  + YGSG
Sbjct:   68 YLDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPSKSSTYSTNGQTFSLQYGSG 137          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.245e-17
Identity = 41/78 (52.56%), Postives = 56/78 (71.79%), Query Frame = 1
Query:  253 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            D  PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S++C  H+R+  + S+TY     +  I YG+G
Sbjct:   64 DEQPLENYLDMEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACTNHNRFNPQDSSTYQSTSGTVSITYGTG 140          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.627e-17
Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 1
Query:  259 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFS-ISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +P+ +F DAQY+G I IG+P Q F V+FDTGSSNLW+PS KC  + ++C  H++Y S  S+TY   G    I YGSG
Sbjct:   53 IPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSG 129          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEPA_CHICK (Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17
Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 1
Query:  226 HHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +H +  + E   P+ N+MDA Y+G I IG+P Q+FSVIFDTGSSNLWVPS  C  S +C  H R+   KS+TY    ++  I YG+G
Sbjct:   38 YHPVLTATESYEPMTNYMDASYYGTISIGTPQQDFSVIFDTGSSNLWVPSIYCK-SSACSNHKRFDPSKSSTYVSTNETVYIAYGTG 123          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17
Identity = 39/74 (52.70%), Postives = 56/74 (75.68%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +KN  D +Y+G I IG+PP++F VIFDTGSSNLWV SS C  + +C  H+++K R+S+TY E GK+ ++ YG+G
Sbjct:    6 MKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-SAQACSNHNKFKPRQSSTYVETGKTVDLTYGTG 78          
The following BLAST results are available for this feature:
BLAST of DN617342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
PEPA_CANFA9.536e-1856.76Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
RENI_PANTR1.245e-1747.06Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_MACMU1.245e-1747.06Renin OS=Macaca mulatta GN=REN PE=2 SV=2[more]
RENI_MACFA1.245e-1747.06Renin OS=Macaca fascicularis GN=REN PE=2 SV=1[more]
RENI_HUMAN1.245e-1747.06Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]
PEPC_SORUN1.245e-1757.75Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1[more]
PEPA2_MACFU1.245e-1752.56Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
CATD_DICDI1.627e-1751.95Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]
PEPA_CHICK2.124e-1749.43Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1[more]
PEP2B_GADMO2.124e-1752.70Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01B07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617342 ID=DN617342; Name=DN617342; organism=Citrus sinensis; type=EST; length=487bp
TTCAAACTCAGCTTCAGCAGAAAACCAAAGAACATCATGGAGCAGAAACT
TCTTCGGTCAGTTTTCTGTTTATGGGTGCTAGCGTCGTGCTTGCTTCTTC
CTGCTTCCTCTAATGGCTTACGGAGAATTGGCTTGAAGAAGCGGCGTCTA
GATCTTCATAGTCTAAATGCTGCAAGAATAACAAGAAAAGAGCGATATAT
GGGGGGAGCAGGTGTTAGTGGCGTGCACCATCGTTTGGGTGATTCAGATG
AAGATATTTTGCCTTTGAAGAACTTTATGGATGCTCAATACTTTGGAGAG
ATTGGTATTGGCTCTCCCCCACAAAATTTCAGTGTCATATTTGATACCGG
CAGTTCCAATCTCTGGGTTCCATCTTCAAAGTGCTATTTCTCTATTTCCT
GCTATTTCCATTCGAGGTACAAGTCCAGAAAATCCAATACATATACCGAA
ATGGGAAAATCCTGTGAAATAAACTATGGATCTGGAT
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