DN617337

Overview
NameDN617337
Unique NameDN617337
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:1256..1836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617337 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.500e-19
Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = -1
Query:  431 VKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 583
            +KE+FDFRPGM+ INLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  337 IKENFDFRPGMIAINLDLKRGGNLRYQKTAAYGHFGRDDPDFTWETVKILK 387          
BLAST of DN617337 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.676e-19
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = -1
Query:  431 VKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 583
            +KE+FDFRPGM+ INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  337 IKENFDFRPGMIAINLDLMRGGNSRYQKTAAYGHFGRDDPDFTWETVKLLK 387          
BLAST of DN617337 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-18
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = -1
Query:  413 VKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 583
            +KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK L    PQA
Sbjct:  337 IKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL---NPQA 390          
BLAST of DN617337 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.003e-18
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = -1
Query:  413 VKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 583
            +KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK L    PQA
Sbjct:  337 IKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL---NPQA 390          
BLAST of DN617337 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = -1
Query:  431 VKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 583
            +KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDF+WE VK LK
Sbjct:  337 IKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFSWETVKVLK 387          
BLAST of DN617337 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.448e-17
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = -1
Query:  431 VKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 583
            +KE+FDFRPGM+ INLDLKRGGN R+ KTAA GH GRDDPDFTWE VK LK
Sbjct:  337 IKENFDFRPGMIAINLDLKRGGNFRYQKTAALGHLGRDDPDFTWETVKILK 387          
BLAST of DN617337 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.448e-17
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = -1
Query:  431 VKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 583
            +KE+FDFRPGM+ INLDLKRGGN R+ KTAAYGHFGRDD D TWE VK LK
Sbjct:  337 IKENFDFRPGMIAINLDLKRGGNFRYQKTAAYGHFGRDDADLTWETVKILK 387          
BLAST of DN617337 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = -1
Query:  431 VKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 583
            +KE+FDFRPGM+ INLDL RGGN R+ KTAAYGHFGRD+ DFTWE VK LK
Sbjct:  337 IKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEADFTWETVKALK 387          
BLAST of DN617337 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.225e-16
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = -1
Query:  431 VKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 583
            +++ FDFRPG++  NLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK L+
Sbjct:  340 IRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPDFTWETVKKLE 390          
BLAST of DN617337 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.825e-13
Identity = 37/51 (72.55%), Postives = 40/51 (78.43%), Query Frame = -1
Query:  434 VKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD-FTWEVVKPL 583
            VKE FDFR GM+  +LDLKRGGN R+  TAAYGHFGRDD D FTWE V PL
Sbjct:  336 VKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVPL 386          
The following BLAST results are available for this feature:
BLAST of DN617337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
METK1_ACTCH4.500e-1982.35S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK4_POPTR7.676e-1980.39S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK2_PETHY1.003e-1877.19S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK1_PETHY1.003e-1877.19S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK1_TOBAC1.309e-1880.39S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK3_CATRO1.448e-1778.43S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_ACTCH1.448e-1778.43S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK2_TOBAC3.225e-1776.47S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK_CHLRE1.225e-1672.55S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTTA2.825e-1372.55S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01B05_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617337 ID=DN617337; Name=DN617337; organism=Citrus sinensis; type=EST; length=583bp
TTTTTTAGGCAAACCGCACACACATCAGAGTGATATTAATAAGCAAAACA
ACTATCTGGCTTTAGCCAAAGTTACAAATTAATACAACTCGCTGCTGCCT
TCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAATTTTACTAA
TTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATCACTACACAACAG
TGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAGTGGGGAAAGAAG
AAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTCTGAACACAGGAG
ATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCAT
CCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAGTTTTCACTTTTC
AACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTT
CCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGTC
TTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCAT
CATTCCTGGCCTGAAATCAAAGCTTTCCTTCAC
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