DN617334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: UTP15_BOVIN (U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus GN=UTP15 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = 2 Query: 215 DGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECK-YTIQEGDAHTEWVSCVRFSP-NTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631 DG+ ++GS DG ++L+D++ R+F GHTK V SV F+ D +VS + D T+KLW+ + T +E H+++V C S NT V+ S+D TVK+++ + H V +V + P G L S G Sbjct: 91 DGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHSVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKE---HSDYVRCGCASKLNT--DLFVTGSYDHTVKMFD-ARTNQSVISVEHGQPVESVLLFPSGGLLVSAG 225
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: PLAP_XENLA (Phospholipase A-2-activating protein OS=Xenopus laevis GN=plaa PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 2 Query: 23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCV 460 T++ HT V A+ + +++T S DKSI +W + E T+ GH V+ + +D +F LS S D +R W L G+ + + GHT + SV +++ V+ S DR+I++W GEC TI+ A + W CV Sbjct: 152 TLQGHTAAVWAVKI-LPEQGLMLTGSADKSIKLWKAGRCEMTF-------LGHEDCVRGLATINDTEF-LSCSNDASVRRW-LITGECLQIYYGHTNYIYSVCLFPNSQDFVTTSEDRSIRIWRK-GECTQTIRL-PAQSVWCCCV 285
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: GBB1_DROME (Guanine nucleotide-binding protein subunit beta-1 OS=Drosophila melanogaster GN=Gbeta13F PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 46/185 (24.86%), Postives = 85/185 (45.95%), Query Frame = 2 Query: 74 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628 + + IVT+S D S +W + G+ GH+ V + L+ + +SG+ D +LWD+ EG + F GH D+ +V F + + + S D T +L++ + + + D ++ V FS + +++ D VW+ + LAGH V+ + V+ +G A+G Sbjct: 153 DDNQIVTSSGDMSCGLWDIET-----GLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKS--GRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATG 330
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: FBW10_HUMAN (F-box/WD repeat-containing protein 10 OS=Homo sapiens GN=FBXW10 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 44/137 (32.12%), Postives = 68/137 (49.64%), Query Frame = 2 Query: 176 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYV 583 GH+ V+ + L + F LSGS+D +R WDL G R F GH + + ++VS RD +K+W+ G+C T + H + + R + IVS+ VKVW+++ +L TL+GH G V Sbjct: 451 GHAGSVRALFLCEEENFLLSGSYDLSIRYWDLKSGVCTRIFGGHQGTI--TCMDLCKNRLVSGGRDCQVKVWDVDTGKCLKTFR----HKDPILATRIN----DTYIVSSCERGLVKVWHIAMAQLVKTLSGHEGAV 577
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: COPA2_ARATH (Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 40/130 (30.77%), Postives = 66/130 (50.77%), Query Frame = 2 Query: 167 RLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKA 556 R H V+ V + +SG D ++++W+ + +GH + +V F +N IVSAS D+TI++WN ++ G H +V C F P + +VSAS D+TV+VW++ K K+ Sbjct: 46 RFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTG--HNHYVMCASFHPK--EDLVVSASLDQTVRVWDIGALKKKS 171
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: HAT2_USTMA (Histone acetyltransferase type B subunit 2 OS=Ustilago maydis GN=HAT2 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11 Identity = 50/158 (31.65%), Postives = 85/158 (53.80%), Query Frame = 2 Query: 86 IVTASRDKSIIVWHLTKEEKTYGVAR--RRLTGHSHFVQDVVLSSDGQFALSGSW--DGELRLWDLAEGKSARRF--VGHTKDVLSVAFSIDNRQI-VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS 538 I+ AS D ++ W + K + TGH+ V+DV + + +L GS D +L +WD+ E SA ++ HT +V ++AFS +N I V+ S D+++ +W+ L K + ++HT+ + V +SP+ + SAS DR V +W+LS Sbjct: 257 ILAASEDTTVCHWDINNYTKPNNTLQPSATYTGHTAIVEDVAWHNHHE-SLFGSVGDDRQLLIWDIREPASAPKYRVEAHTGEVNALAFSPENENILVTGSSDKSVGVWD-LRNLKVKLHSLESHTDEILSVCWSPHHAT-VLASASADRRVNLWDLS 411
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: CIAO1_RAT (Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Rattus norvegicus GN=Ciao1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11 Identity = 57/214 (26.64%), Postives = 98/214 (45.79%), Query Frame = 2 Query: 2 EGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLT-GHSHFVQDVVLSSDGQFALSGSWDGELRLW--DLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKY-TIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL--SNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 + LVL+ + AH D ++ + D+ I +W E + + L+ GH V+ V S G + S S+D +W + + + GH +V SVA++ + + SRD+++ +W E +Y + ++HT+ V V + P+ Q + SAS+D TVK++ + ATL GH V ++A P G AS Sbjct: 3 DALVLQSRVPAHPDSRCWFLAWNPTGTLLASCGGDRKIRIWGT---EGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS--QELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLAS 211
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: CIAO1_MOUSE (Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Mus musculus GN=Ciao1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11 Identity = 57/214 (26.64%), Postives = 98/214 (45.79%), Query Frame = 2 Query: 2 EGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLT-GHSHFVQDVVLSSDGQFALSGSWDGELRLW--DLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKY-TIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL--SNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 + LVL+ + AH D + ++ + D+ I +W E + + L+ GH V+ V S G + S S+D +W + + + GH +V SVA++ + + SRD+++ +W E +Y + +HT+ V V + P+ Q + SAS+D TVK++ + ATL GH V ++A P G AS Sbjct: 3 DSLVLQSRVPAHPDSRCWFLAWNPSGTLLASCGGDRKIRIWGT---EGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPS--QELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLAS 211 The following BLAST results are available for this feature:
BLAST of DN617334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617334 ID=DN617334; Name=DN617334; organism=Citrus sinensis; type=EST; length=633bpback to top |