DN617334 | Citrus Genome Database

Overview


Name	DN617334
Unique Name	DN617334
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	633

Libraries


Library Name	Type
Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.645e-20
Identity = 56/154 (36.36%), Postives = 87/154 (56.49%), Query Frame = 2

Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628
            L GH+  V  V  S +G++  S S D  + +W   +GK  R   GH  ++  VA+S D+ ++VSAS D+T+KLW+   G+C  T++    H+ +V C  F+P +    I+S S+D TVK+W +   K   TL+ H+  V+ V  +  GSL  SG
Sbjct:   37 LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLK---GHSNYVFCCNFNPPS--NLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSG 185

HSP 2 Score: 93.2041 bits (230), Expect = 1.179e-18
Identity = 65/201 (32.34%), Postives = 102/201 (50.75%), Query Frame = 2

Query:   14 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK-LKATLAGHTGYVNTVAVSPDG 610
            LK T+  HT+ V+++     N + + ++S D+ II+W         G   R L GH+  + DV  SSD    +S S D  L+LWD+  GK  +   GH+  V    F+  +  I+S S D T+K+W    G+C  T+    AH++ VS V F  N     IVS S+D   ++W+ ++ + LK  +      V+ V  SP+G
Sbjct:   33 LKCTLVGHTEAVSSVKFS-PNGEWLASSSADRLIIIWGAYD-----GKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTL---SAHSDPVSAVHF--NCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNG 222

HSP 3 Score: 87.0409 bits (214), Expect = 8.448e-17
Identity = 63/185 (34.05%), Postives = 96/185 (51.89%), Query Frame = 2

Query:   77 SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLS-VAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            S++I++ S D+++ +W    E KT G   + L+ HS  V  V  +  G   +SGS+DG  R+WD A G+  +  V      +S V FS + + I++A+ D T+KLW+ + G C  T   G  + ++     FS  T    IVS S D  V +WNL   ++   L GHT  V + A  P  +L AS
Sbjct:  137 SNLIISGSFDETVKIW----EVKT-GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT-GHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIAS 314

[Close]

BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: LIS1_PONAB (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.645e-20
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 2

Query:   83 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGS 613
            ++V+AS D +I VW     +   G   R L GH+  +QD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + KA L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 89.3521 bits (220), Expect = 1.702e-17
Identity = 61/221 (27.60%), Postives = 100/221 (45.25%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            T++ HTD +  I  P D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V  V     G    S
Sbjct:  145 TLKGHTDSIQDI--PFDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355

HSP 3 Score: 81.2629 bits (199), Expect = 4.635e-15
Identity = 53/153 (34.64%), Postives = 72/153 (47.06%), Query Frame = 2

Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  +  + F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 75.8702 bits (185), Expect = 1.948e-13
Identity = 65/211 (30.81%), Postives = 98/211 (46.45%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTV 592
            TM  H   V+++A  + N D IV+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 50/190 (26.32%), Postives = 88/190 (46.32%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 529
            T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  229 TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: LIS1_CHICK (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.645e-20
Identity = 64/177 (36.16%), Postives = 91/177 (51.41%), Query Frame = 2

Query:   83 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGS 613
            ++V+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + KA L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 87.4261 bits (215), Expect = 6.468e-17
Identity = 60/220 (27.27%), Postives = 97/220 (44.09%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTI------------------VSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            T++ HTD V  I+       ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +   TI                  +S S D+T+K+W++S      TL GH  +V  V     G    S
Sbjct:  145 TLKGHTDSVQDISFD-HTGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355

HSP 3 Score: 82.0333 bits (201), Expect = 2.718e-15
Identity = 54/153 (35.29%), Postives = 73/153 (47.71%), Query Frame = 2

Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 75.8702 bits (185), Expect = 1.948e-13
Identity = 60/211 (28.44%), Postives = 98/211 (46.45%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ--------------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTV 592
            TM  H   V+++A  + N D IV+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  +       H   V  ++++ ++                      ++S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 70.4774 bits (171), Expect = 8.182e-12
Identity = 50/190 (26.32%), Postives = 88/190 (46.32%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 529
            T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  229 TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: LIS1_MACFA (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.148e-20
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 2

Query:   83 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGS 613
            ++V+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   +VSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + KA L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 88.5817 bits (218), Expect = 2.903e-17
Identity = 62/221 (28.05%), Postives = 101/221 (45.70%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTA-SRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            T++ HTD V  I+   D+S  ++T+ S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V  V     G    S
Sbjct:  145 TLKGHTDSVQDIS--FDHSGKLLTSCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355

HSP 3 Score: 81.6481 bits (200), Expect = 3.549e-15
Identity = 53/153 (34.64%), Postives = 73/153 (47.71%), Query Frame = 2

Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     +VSAS D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 75.0998 bits (183), Expect = 3.322e-13
Identity = 64/211 (30.33%), Postives = 98/211 (46.45%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTV 592
            TM  H   V+++A  + N D +V+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHLVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 50/190 (26.32%), Postives = 88/190 (46.32%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 529
            T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  229 TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: LIS1A_DANRE (Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.148e-20
Identity = 64/177 (36.16%), Postives = 91/177 (51.41%), Query Frame = 2

Query:   83 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGS 613
            +IV+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W       Y ++    H EWV  VR  PN     I S+S D+TV+VW ++  + KA L  H   V  ++ +P+ +
Sbjct:  122 VIVSASEDATIKVW-----DHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--ATGYCVKTFTGHREWVRMVR--PNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESA 289

HSP 2 Score: 97.0561 bits (240), Expect = 8.163e-20
Identity = 64/220 (29.09%), Postives = 102/220 (46.36%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA------------------SWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            T++ HTD V  I+       ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++A G   + F GH + V  V  + D   I S+S D+T+++W     ECK  ++E   H   V C+ ++P +  PTI+ A                  S D+T+K+W++S      TL GH  +V  V V P G    S
Sbjct:  145 TLKGHTDSVQDISFD-HTGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVS 355

HSP 3 Score: 81.6481 bits (200), Expect = 3.549e-15
Identity = 54/153 (35.29%), Postives = 74/153 (48.37%), Query Frame = 2

Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W ++      T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 80.8777 bits (198), Expect = 6.054e-15
Identity = 60/211 (28.44%), Postives = 100/211 (47.39%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ--------------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTV 592
            TM  H   V+++A  + N D IV+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  +       H   V  ++++ ++                      ++S SRD+TIK+W+ ++G C  T+     H  WV  V   P      IVS + D+T+++W+  N +   TL+ H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLV---GHDNWVRGVLVHPGGKY--IVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSL 386

HSP 5 Score: 68.5514 bits (166), Expect = 3.109e-11
Identity = 50/190 (26.32%), Postives = 87/190 (45.79%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 529
            T   H + V  +  P  +  +I ++S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V      + IVS + D+T+++W+   + C  T+    AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  229 TFTGHREWVRMVR-PNQDGTLIASSSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTL---SAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.806e-20
Identity = 55/154 (35.71%), Postives = 87/154 (56.49%), Query Frame = 2

Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628
            L GH+  V  V  S +G++  S S D  + +W   +GK  +   GH  ++  VA+S D+ ++VSAS D+T+KLW+   G+C  T++    H+ +V C  F+P +    I+S S+D TVK+W +   K   TL+ H+  V+ V  +  GSL  SG
Sbjct:   37 LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLK---GHSNYVFCCNFNPPS--NLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSG 185

HSP 2 Score: 92.4337 bits (228), Expect = 2.011e-18
Identity = 67/203 (33.00%), Postives = 105/203 (51.72%), Query Frame = 2

Query:   14 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK-LKATLAGHTGYVNTVAVSPDG 610
            LK T+  HT+ V+++     N + + ++S D+ II+W  +  K EKT       L GH+  + DV  SSD    +S S D  L+LWD+  GK  +   GH+  V    F+  +  I+S S D T+K+W    G+C  T+    AH++ VS V F  N     IVS S+D   ++W+ ++ + LK  +      V+ V  SP+G
Sbjct:   33 LKCTLVGHTEAVSSVKFS-PNGEWLASSSADRLIIIWGAYDGKYEKT-------LYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTL---SAHSDPVSAVHF--NCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNG 222

HSP 3 Score: 87.0409 bits (214), Expect = 8.448e-17
Identity = 63/185 (34.05%), Postives = 96/185 (51.89%), Query Frame = 2

Query:   77 SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLS-VAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            S++I++ S D+++ +W    E KT G   + L+ HS  V  V  +  G   +SGS+DG  R+WD A G+  +  V      +S V FS + + I++A+ D T+KLW+ + G C  T   G  + ++     FS  T    IVS S D  V +WNL   ++   L GHT  V + A  P  +L AS
Sbjct:  137 SNLIISGSFDETVKIW----EVKT-GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT-GHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIAS 314

[Close]

BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: LIS1_PIG (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus scrofa GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 2.806e-20
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 2

Query:   83 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGS 613
            ++V+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSA+RD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + KA L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 86.2705 bits (212), Expect = 1.441e-16
Identity = 60/221 (27.15%), Postives = 100/221 (45.25%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            T++ HTD V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S + D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V  V     G    S
Sbjct:  145 TLKGHTDSVQDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355

HSP 3 Score: 81.2629 bits (199), Expect = 4.635e-15
Identity = 53/153 (34.64%), Postives = 73/153 (47.71%), Query Frame = 2

Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSA+ D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 74.7146 bits (182), Expect = 4.339e-13
Identity = 64/211 (30.33%), Postives = 98/211 (46.45%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTV 592
            TM  H   V+++A  + N D IV+A+RDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSAARDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 50/190 (26.32%), Postives = 88/190 (46.32%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 529
            T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  229 TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: LIS1_BOVIN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos taurus GN=PAFAH1B1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.806e-20
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 2

Query:   83 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGS 613
            ++V+AS D +I VW     +   G   R L GH+  V+D+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + KA L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289

HSP 2 Score: 87.4261 bits (215), Expect = 6.468e-17
Identity = 61/221 (27.60%), Postives = 100/221 (45.25%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            T++ HTD V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V  V     G    S
Sbjct:  145 TLKGHTDSVEDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355

HSP 3 Score: 82.0333 bits (201), Expect = 2.718e-15
Identity = 54/153 (35.29%), Postives = 73/153 (47.71%), Query Frame = 2

Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251

HSP 4 Score: 75.8702 bits (185), Expect = 1.948e-13
Identity = 65/211 (30.81%), Postives = 98/211 (46.45%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTV 592
            TM  H   V+++A  + N D IV+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386

HSP 5 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 50/190 (26.32%), Postives = 88/190 (46.32%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 529
            T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  229 TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: NUDF_USTMA (Nuclear distribution protein PAC1 OS=Ustilago maydis GN=PAC1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.786e-20
Identity = 71/203 (34.98%), Postives = 103/203 (50.74%), Query Frame = 2

Query:   23 TMRAHTDMVTAIAT-PIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDL-AEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCA 622
            TM+ H   VT ++  P+ +   I +AS D ++ +W     +   G   R L GH+  VQDV   S G + LS S D  +++WD   + K+ +   GH   V SV F   +  IVSASRD+TIK+W  + G C  T+Q    H EWV      P+     +VS S D+T +VW++S+ + K  L GH   V     +P  S  A
Sbjct:  117 TMQGHRLPVTKVSFHPVFSQ--IASASEDTTVKLW-----DWETGDFERTLKGHTKAVQDVDFDSKGNYVLSCSSDLSIKVWDANNDYKNIKTLQGHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQ---GHAEWVRSA--IPSDDAKWLVSCSTDQTARVWDVSSGETKVELRGHEHVVEVAIFAPVASYAA 307

HSP 2 Score: 90.1225 bits (222), Expect = 9.979e-18
Identity = 59/218 (27.06%), Postives = 110/218 (50.46%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAF--------------------------SIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVA 595
            T++ H   V+++   +   D IV+ASRDK+I +W     E + G   + L GH+ +V+  + S D ++ +S S D   R+WD++ G++     GH + V+ VA                           S+  + + + SRD+TI++W+++ G+C  T+     H  WV  + FSPN    +++S S D+T+++W+L + +   T+  H  +   +A
Sbjct:  202 TLQGHDHSVSSVRF-LPGDDYIVSASRDKTIKIW-----EFSTGFCTKTLQGHAEWVRSAIPSDDAKWLVSCSTDQTARVWDVSSGETKVELRGH-EHVVEVAIFAPVASYAAIRQLASLDPNASKDASASMAGQFVATGSRDKTIRIWDSISGQCLKTLT---GHDNWVRGLAFSPNG--KSLLSVSDDKTMRLWDLQSGRCTRTIEAHQHFATGIA 407

HSP 3 Score: 77.7962 bits (190), Expect = 5.125e-14
Identity = 54/156 (34.62%), Postives = 69/156 (44.23%), Query Frame = 2

Query:  158 ARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            AR  + GH   V  V          S S D  ++LWD   G   R   GHTK V  V F      ++S S D +IK+W+   + K  I+    H   VS VRF P      IVSAS D+T+K+W  S      TL GH  +V +   S D     S
Sbjct:  114 ARHTMQGHRLPVTKVSFHPVFSQIASASEDTTVKLWDWETGDFERTLKGHTKAVQDVDFDSKGNYVLSCSSDLSIKVWDANNDYK-NIKTLQGHDHSVSSVRFLPG--DDYIVSASRDKTIKIWEFSTGFCTKTLQGHAEWVRSAIPSDDAKWLVS 266

HSP 4 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 56/220 (25.45%), Postives = 97/220 (44.09%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSP----------NTLQPT-------------IVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDG 610
            T++ HT  V  +       + +++ S D SI VW    + K      + L GH H V  V       + +S S D  +++W+ + G   +   GH + V S   S D + +VS S D+T ++W+ + GE K  ++    H   V    F+P           +L P              + + S D+T+++W+  + +   TL GH  +V  +A SP+G
Sbjct:  159 TLKGHTKAVQDVDFD-SKGNYVLSCSSDLSIKVWDANNDYKNI----KTLQGHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQGHAEWVRSAIPSDDAKWLVSCSTDQTARVWDVSSGETKVELR---GHEHVVEVAIFAPVASYAAIRQLASLDPNASKDASASMAGQFVATGSRDKTIRIWDSISGQCLKTLTGHDNWVRGLAFSPNG 370

HSP 5 Score: 70.4774 bits (171), Expect = 8.182e-12
Identity = 49/186 (26.34%), Postives = 84/186 (45.16%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQ-------------------------DVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA 502
            T++ H + V + A P D++  +V+ S D++  VW ++      G  +  L GH H V+                         D   S  GQF  +GS D  +R+WD   G+  +   GH   V  +AFS + + ++S S D+T++LW+   G C  TI   +AH  + + + +    ++  I  A
Sbjct:  244 TLQGHAEWVRS-AIPSDDAKWLVSCSTDQTARVWDVSS-----GETKVELRGHEHVVEVAIFAPVASYAAIRQLASLDPNASKDASASMAGQFVATGSRDKTIRIWDSISGQCLKTLTGHDNWVRGLAFSPNGKSLLSVSDDKTMRLWDLQSGRCTRTI---EAHQHFATGIAWGKAKIEAPIPPA 420

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BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.250e-20
Identity = 63/208 (30.29%), Postives = 105/208 (50.48%), Query Frame = 2

Query:   11 VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTG-YVNTVAVSPDGSLCASG 628
            +LK T++ H   ++++    D    + +AS DK+I +W         G   R L GH   + D+  S D +   S S D  +++WD+  GK  +   GH + V  V+F+  +  IVS S D  +++W+   GEC   I    AH++ V+ V F  N     +VS S+D TV++W+ +  +L  T++   G  V+ V  SP+G    +G
Sbjct:   37 ILKYTLKGHLKSISSVKFSPDGK-WLASASADKTIKIWGAYD-----GKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMI---SAHSDPVTGVHF--NRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAG 233

HSP 2 Score: 90.5077 bits (223), Expect = 7.641e-18
Identity = 72/247 (29.15%), Postives = 108/247 (43.72%), Query Frame = 2

Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPN-------TLQPT-------------------------------------IVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628
            T+  H + ++ IA   D S +I +AS DK+I +W +       G   + L GH  +V  V  +      +SGS+D  +R+WD+  G+  +    H+  V  V F+ D   +VS S D T+++W+T  G+   TI   D     VS V+FSPN       TL  T                                     IV+ S D  + ++NL   ++  TLAGH   V TVA  P  ++ ASG
Sbjct:   83 TLEGHKEGISDIAWSQD-SKLICSASDDKTIKIWDVES-----GKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKE--VSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASG 321

The following BLAST results are available for this feature:

BLAST of DN617334 vs. ExPASy Swiss-Prot

BLAST of DN617334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348


Match Name	E-value	Identity	Description
WDR5B_PONAB	1.645e-20	36.36	WD repeat-containing protein 5B OS=Pongo abelii PE...	[more]
LIS1_PONAB	1.645e-20	35.59	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_CHICK	1.645e-20	36.16	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_MACFA	2.148e-20	35.59	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1A_DANRE	2.148e-20	36.16	Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1...	[more]
WDR5B_HUMAN	2.806e-20	35.71	WD repeat-containing protein 5B OS=Homo sapiens GN...	[more]
LIS1_PIG	2.806e-20	35.59	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_BOVIN	2.806e-20	35.59	Platelet-activating factor acetylhydrolase IB subu...	[more]
NUDF_USTMA	4.786e-20	34.98	Nuclear distribution protein PAC1 OS=Ustilago mayd...	[more]
WDR5_DICDI	6.250e-20	30.29	WD repeat-containing protein 5 homolog OS=Dictyost...	[more]

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Properties


Property Name	Value
Genbank description	UCRCS11_01B03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DN617334 ID=DN617334; Name=DN617334; organism=Citrus sinensis; type=EST; length=633bp
TGAAGGTCTCGTTCTCAAAGGAACCATGCGCGCCCACACCGACATGGTAA
CGGCGATCGCCACCCCAATCGACAACTCTGACATGATCGTGACGGCCTCG
CGTGACAAGTCCATCATTGTCTGGCACCTCACTAAGGAGGAAAAGACCTA
CGGCGTTGCGCGCCGTCGTTTGACCGGCCACTCTCACTTCGTGCAGGACG
TCGTCCTCTCCTCGGACGGCCAGTTCGCTCTCTCCGGCTCCTGGGACGGC
GAGCTCCGCCTCTGGGATTTGGCCGAGGGCAAATCCGCCCGCAGGTTCGT
CGGCCACACTAAGGACGTTCTCTCCGTCGCCTTCTCGATCGACAACCGTC
AGATTGTATCGGCCTCTCGTGACCGTACGATCAAGTTGTGGAACACGCTC
GGCGAGTGCAAGTACACGATTCAAGAGGGAGACGCTCACACTGAGTGGGT
TTCTTGTGTTAGGTTCAGCCCCAACACGCTTCAGCCCACTATCGTTTCCG
CCTCGTGGGACCGTACGGTCAAAGTGTGGAATTTGAGCAACTGCAAGCTT
AAGGCTACTCTTGCCGGGCACACTGGATACGTGAACACCGTCGCAGTGTC
GCCGGATGGTTCGTTGTGTGCCAGTGGAGGGGA