DN617334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: LIS1_CAEEL (Lissencephaly-1 homolog OS=Caenorhabditis elegans GN=lis-1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.540e-18 Identity = 67/218 (30.73%), Postives = 98/218 (44.95%), Query Frame = 2 Query: 14 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTL-------QP------TIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 L+ T++ HTD V IA + V+ S D SI +W + TY + L GH H V V G F LS S D ++ WD++ G F GH V + S D SAS D+T+ +W+ K +++ H V CV ++P+T QP + S S DR++K WN++ + TL H +V +A P G S Sbjct: 140 LERTLKGHTDAVNDIAIDAAGKQL-VSCSSDLSIKLWDFGQ---TYDCLKS-LKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRD---HEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLIS 349 HSP 2 Score: 85.5001 bits (210), Expect = 2.458e-16 Identity = 58/177 (32.77%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 83 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPD 607 ++ + S D +I VW + G R L GH+ V D+ + + G+ +S S D ++LWD + + GH V SV F ++SASRD TIK W+ + G C YT + H +WV +R S + SAS D+TV VW+ + K L H V V +PD Sbjct: 120 IMASCSEDATIKVW-----DYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFR---GHNDWVRMIRISND--GTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPD 286 HSP 3 Score: 82.4185 bits (202), Expect = 2.081e-15 Identity = 51/154 (33.12%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 164 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 ++LTGH + V+ S S D +++WD G+ R GHT V +A +Q+VS S D +IKLW+ G+ ++ H VS V F P ++SAS D T+K W++S T GH +V + +S DG+L AS Sbjct: 100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWD-FGQTYDCLKSLKGHEHTVSSVTFLPT--GDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFAS 250 HSP 4 Score: 73.9442 bits (180), Expect = 7.401e-13 Identity = 55/207 (26.57%), Postives = 95/207 (45.89%), Query Frame = 2 Query: 23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ---------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVA 595 +++ H V+++ T + D +++ASRD +I W ++ Y GH+ +V+ + +S+DG S S D + +W A + H V V ++ D + S SRDR+IK WN G+ +T+ AH WV + F P ++S + D+T++VW LS + + H +V+TVA Sbjct: 186 SLKGHEHTVSSV-TFLPTGDFVLSASRDHTIKQWDISTGYCVY-----TFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLL---AHENWVRGLAFHPKGKY--LISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVA 381
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: UTP13_SCHPO (Probable U3 small nucleolar RNA-associated protein 13 OS=Schizosaccharomyces pombe GN=utp13 PE=2 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 2.011e-18 Identity = 65/206 (31.55%), Postives = 108/206 (52.43%), Query Frame = 2 Query: 35 HTDMVTAIAT-PIDNSD---MIVTASRDKSIIVWHLTKEEKTYGVARRR---LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631 HT VTA+A P+D + + ++S+D+++ ++L + + R + H V + +S DG+ S S D ++LWD + G+ GH + V + +F+ +RQ+ S S DRTI++WN + + +Q + HT + + + Q +VSA+ D VKVW+LS+ + ATL H V +A DGSL SGG Sbjct: 409 HTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNV--DTQQCVQTLEGHTGAILKLIYISQGTQ--VVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGG 610
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.011e-18 Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 2 Query: 47 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631 +T TP+++ ++IV S+ S+ +W L + R L GH V + G+F SGS D ++LWD+ R+ GHT+ V + FS D + + SAS D ++KLW+ T G+ + E H V+ + F PN + + S S DRTV+ W+L +L G T V + S DG GG Sbjct: 59 LTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAK-----ILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGG 250
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.479e-18 Identity = 57/157 (36.31%), Postives = 81/157 (51.59%), Query Frame = 2 Query: 170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDG----SLCASG 628 LTGH V V +SS S S DG + LW +G+ R F GHT + V FS + + +A +D+T+K+W+ G T++ H + V V FSP+ + S S DRTV++W+ + K A L GHT V+ SPDG S+C G Sbjct: 556 LTGHRDGVTSVAISSHKNLIASASRDGTVHLWT-PQGEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDGNLLQTLK---GHQDSVYSVSFSPD--GEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDG 706 HSP 2 Score: 86.6557 bits (213), Expect = 1.103e-16 Identity = 65/238 (27.31%), Postives = 104/238 (43.70%), Query Frame = 2 Query: 17 KGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS----------------------------------------NCKLKATLAGHTGYVNTVAVSPDG 610 K + H D VT++A + ++I +ASRD ++ +W G R TGH+ + V S +G+ + D +++WDL +G + GH V SV+FS D + S SRDRT++LW+ + G HT+ V +FSP+ T+VS D +++W+L ++KATL+GH +V V +PDG Sbjct: 553 KNVLTGHRDGVTSVAIS-SHKNLIASASRDGTVHLW------TPQGEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDL-DGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGG--HTKSVDDAQFSPD--GQTLVSVCRDGQIRLWDLDGNLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVRLWTPQGEIKATLSGHDEFVTRVVFTPDG 778
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.850e-18 Identity = 64/202 (31.68%), Postives = 95/202 (47.03%), Query Frame = 2 Query: 47 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631 +T TP+++ ++IV S+ S+ VW L + R L GH V + G F SGS D ++LWD+ R+ GHT+ V + FS D + + SAS D ++KLW+ T G+ + E H V+ + F PN + + S S DRTV+ W+L +L G T V + S DG GG Sbjct: 59 LTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAK-----ILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCIFCGG 250
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: SWD3_SCHPO (Set1 complex component swd3 OS=Schizosaccharomyces pombe GN=swd3 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.641e-18 Identity = 48/152 (31.58%), Postives = 83/152 (54.61%), Query Frame = 2 Query: 170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 L GH V V +S + ++ + S DG +++W + GH + + V ++ ++ + SAS D+TI++W+ C +G HT +VS + F+P L +VS SWD TV++WNL + L H+ + +V++S DG+LCA+ Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKG--HTNYVSSIDFNP--LGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCAT 197 HSP 2 Score: 72.7886 bits (177), Expect = 1.649e-12 Identity = 38/118 (32.20%), Postives = 64/118 (54.24%), Query Frame = 2 Query: 77 SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQE 427 S + +AS DK+I +W K + R L GH+++V + + G +SGSWD +R+W+L +G R H++ ++SV+ S D +AS D ++W+ L G+C T+ E Sbjct: 108 SKYLASASDDKTIRIWDFEKR-----CSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVE 220
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.979e-18 Identity = 55/150 (36.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 188 FVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628 +V+ + S DG++ ++G+ D +++LWDL+ K F GH +D+ S+ FS + R IVS S DRT +LW+ G+C K I+ G V+ + SPN I S D+ ++VW++S L L GH V ++A SPD S+ SG Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG------VTAIAISPN--DQFIAVGSLDQIIRVWSVSG-TLVERLEGHKESVYSIAFSPDSSILLSG 502 HSP 2 Score: 88.9669 bits (219), Expect = 2.223e-17 Identity = 59/193 (30.57%), Postives = 98/193 (50.78%), Query Frame = 2 Query: 86 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK------------LKATLAGHTGYVNTVAVSPDGSLCASG 628 +VT + D+ I +W L+ ++ Y +GH + + S +G+F +SGS D RLWD+ G+ + + V ++A S +++ I S D+ I++W+ G ++ + H E V + FSP++ ++S S D+T+KVW L + KAT GHT +V +VAVSPD SG Sbjct: 375 LVTGTEDRQIKLWDLSTQKVRYV-----FSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILK-LEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT---LVERLEGHKESVYSIAFSPDS--SILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSG 556 HSP 3 Score: 82.4185 bits (202), Expect = 2.081e-15 Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 2 Query: 26 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEE-------KTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN 394 + H + V +IA D+S ++++ S DK+I VW L K G+ + TGH+ FV V +S D ++ LSGS D ++ WDL G+S GH V+SV FS D RQ S S D ++W+ Sbjct: 480 LEGHKESVYSIAFSPDSS-ILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.702e-17 Identity = 56/220 (25.45%), Postives = 99/220 (45.00%), Query Frame = 2 Query: 23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 +++ HTD V +A ++ + S D SI +W + + + + GH H V V G + LS S D +++W++A G + + GH + V V I+ + S D+TI++W T +CK +++ H V C+ ++P P + S S D+T+++W++S TL+GH +V +A P G S Sbjct: 145 SLKGHTDSVQDVAFDAQGK-LLASCSADLSIKLWDFQQSYECI----KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRD---HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVS 356 HSP 2 Score: 82.0333 bits (201), Expect = 2.718e-15 Identity = 58/180 (32.22%), Postives = 84/180 (46.67%), Query Frame = 2 Query: 104 DKSIIVWHLTKEEKTYGVARRR------LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 +K +I TK ++T G R LTGH + V+ +S S D +R+WD G+ R GHT V VAF + + S S D +IKLW+ + I+ H VS V F P ++SAS DRT+K+W ++ T GH +V V V +GS+ A+ Sbjct: 76 EKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWD-FQQSYECIKTMHGHDHNVSSVAFVP--AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFAT 252 HSP 3 Score: 75.8702 bits (185), Expect = 1.948e-13 Identity = 60/212 (28.30%), Postives = 102/212 (48.11%), Query Frame = 2 Query: 23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSAR---RFVGHTKD-----------VLSVAFSIDNRQ-------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTV 592 TM H V+++A + D +++ASRD++I +W E G + TGH +V+ V + +G + S D +R+W L K + R HT + ++ A DN++ + S SRD+TI++W+ ++G C T+ H WV + F P +VSAS D+T++VW+L N + TL H + ++ Sbjct: 188 TMHGHDHNVSSVAF-VPAGDYVLSASRDRTIKMW-----EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLS---GHDNWVRGLAFHPGGKY--LVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSI 387 HSP 4 Score: 70.0922 bits (170), Expect = 1.069e-11 Identity = 52/190 (27.37%), Postives = 85/190 (44.74%), Query Frame = 2 Query: 23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 529 T H + V + I+ S + T S D++I VW ++ + L H H V+ + + + G F SGS D +R+WD++ G GH V +AF + +VSAS D+TI++W+ + C T+ AH + + + F + P ++S S D+TVKVW Sbjct: 230 TYTGHREWVRMVRVHIEGS-IFATCSNDQTIRVWLTNSKD-----CKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLY---AHQHFCTSIDF--HKAHPYVISGSVDQTVKVW 408
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.903e-17 Identity = 59/186 (31.72%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 80 DMIVTASRDKSIIVWHLTKEE--KTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631 +++++ S D +I +W L TY GH + V DV + G + +S S+D RLW ++ R FVGH DV V F ++ + + S DRT++LW+ + + G H VS + FS + S S D + +W+LSN L TL HT V T+ S DG++ A+ G Sbjct: 463 NLLLSCSEDSTIRLWSLLTWSCVVTY-------RGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTG--HKGSVSSLAFS--ACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAG 637 HSP 2 Score: 76.2554 bits (186), Expect = 1.491e-13 Identity = 60/212 (28.30%), Postives = 88/212 (41.51%), Query Frame = 2 Query: 71 DNSDMIVTASRDKSIIVWHLT-----------------KE---------EKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628 D+S M+ D S+ +W LT KE + G R L GH+ V + + LS S D +RLW L + GH V V F+ VS S D+T +LW T + ++ H V CV+F PN+ + + S DRTV++W+ + + GH G V+++A S G ASG Sbjct: 387 DDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWAT--DSNQALRVFVGHLSDVDCVQFHPNS--NYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASG 594
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 3.792e-17 Identity = 61/201 (30.35%), Postives = 93/201 (46.27%), Query Frame = 2 Query: 26 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628 +R H D V D D++VT S D ++ VW + K E Y L GH+ V +S G++ +SGS D +++W +G GHT V +A + +V+ SRD T+++W+ G H V CV+F T +VS +D TVK+WN + TL GH V ++ + S+ SG Sbjct: 251 LRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMY-----TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHG--HHAAVRCVQFDGTT----VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSG 436 HSP 2 Score: 75.8702 bits (185), Expect = 1.948e-13 Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 2 Query: 170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631 L GH V + D ++GS D L++W + +G+ VGHT V + S R IVS S DRT+K+W+T+ G +T+Q HT V C+ + + L V+ S D T++VW++ + + ATL GH V V DG+ SGG Sbjct: 251 LRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ---GHTSTVRCMAMAGSIL----VTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGG 395 HSP 3 Score: 72.7886 bits (177), Expect = 1.649e-12 Identity = 55/204 (26.96%), Postives = 88/204 (43.14%), Query Frame = 2 Query: 23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYV--------NTVAVSPD 607 T++ HT V +A ++VT SRD ++ VW + R T H H + DG +SG +D +++W+ G+ R GH V S+ F + + S S D +I++W+ T E + + HT S ++ N L VS + D V+VW++ L+GH + N VA S D Sbjct: 333 TLQGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVES-------GRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNIL----VSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSD 522 The following BLAST results are available for this feature:
BLAST of DN617334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617334 ID=DN617334; Name=DN617334; organism=Citrus sinensis; type=EST; length=633bpback to top |