DN617334

Overview
NameDN617334
Unique NameDN617334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: LIS1_CAEEL (Lissencephaly-1 homolog OS=Caenorhabditis elegans GN=lis-1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.540e-18
Identity = 67/218 (30.73%), Postives = 98/218 (44.95%), Query Frame = 2
Query:   14 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTL-------QP------TIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            L+ T++ HTD V  IA       + V+ S D SI +W   +   TY   +  L GH H V  V     G F LS S D  ++ WD++ G     F GH   V  +  S D     SAS D+T+ +W+      K  +++   H   V CV ++P+T        QP       + S S DR++K WN++   +  TL  H  +V  +A  P G    S
Sbjct:  140 LERTLKGHTDAVNDIAIDAAGKQL-VSCSSDLSIKLWDFGQ---TYDCLKS-LKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRD---HEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLIS 349          

HSP 2 Score: 85.5001 bits (210), Expect = 2.458e-16
Identity = 58/177 (32.77%), Postives = 85/177 (48.02%), Query Frame = 2
Query:   83 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPD 607
            ++ + S D +I VW     +   G   R L GH+  V D+ + + G+  +S S D  ++LWD  +     +   GH   V SV F      ++SASRD TIK W+ + G C YT +    H +WV  +R S +       SAS D+TV VW+ +    K  L  H   V  V  +PD
Sbjct:  120 IMASCSEDATIKVW-----DYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFR---GHNDWVRMIRISND--GTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPD 286          

HSP 3 Score: 82.4185 bits (202), Expect = 2.081e-15
Identity = 51/154 (33.12%), Postives = 76/154 (49.35%), Query Frame = 2
Query:  164 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            ++LTGH   +  V+         S S D  +++WD   G+  R   GHT  V  +A     +Q+VS S D +IKLW+  G+    ++    H   VS V F P      ++SAS D T+K W++S      T  GH  +V  + +S DG+L AS
Sbjct:  100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWD-FGQTYDCLKSLKGHEHTVSSVTFLPT--GDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFAS 250          

HSP 4 Score: 73.9442 bits (180), Expect = 7.401e-13
Identity = 55/207 (26.57%), Postives = 95/207 (45.89%), Query Frame = 2
Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ---------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVA 595
            +++ H   V+++ T +   D +++ASRD +I  W ++     Y        GH+ +V+ + +S+DG    S S D  + +W  A   +      H   V  V ++ D                  + S SRDR+IK WN   G+  +T+    AH  WV  + F P      ++S + D+T++VW LS  +    +  H  +V+TVA
Sbjct:  186 SLKGHEHTVSSV-TFLPTGDFVLSASRDHTIKQWDISTGYCVY-----TFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLL---AHENWVRGLAFHPKGKY--LISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVA 381          
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: UTP13_SCHPO (Probable U3 small nucleolar RNA-associated protein 13 OS=Schizosaccharomyces pombe GN=utp13 PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 2.011e-18
Identity = 65/206 (31.55%), Postives = 108/206 (52.43%), Query Frame = 2
Query:   35 HTDMVTAIAT-PIDNSD---MIVTASRDKSIIVWHLTKEEKTYGVARRR---LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631
            HT  VTA+A  P+D +     + ++S+D+++  ++L  +      + R    +  H   V  + +S DG+   S S D  ++LWD + G+      GH + V + +F+  +RQ+ S S DRTI++WN   + +  +Q  + HT  +  + +     Q  +VSA+ D  VKVW+LS+ +  ATL  H   V  +A   DGSL  SGG
Sbjct:  409 HTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNV--DTQQCVQTLEGHTGAILKLIYISQGTQ--VVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGG 610          
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.011e-18
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 2
Query:   47 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631
            +T   TP+++       ++IV  S+  S+ +W L   +       R L GH   V  +     G+F  SGS D  ++LWD+       R+ GHT+ V  + FS D + + SAS D ++KLW+ T G+    + E   H   V+ + F PN  +  + S S DRTV+ W+L   +L     G T  V  +  S DG     GG
Sbjct:   59 LTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAK-----ILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGG 250          
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.479e-18
Identity = 57/157 (36.31%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDG----SLCASG 628
            LTGH   V  V +SS      S S DG + LW   +G+  R F GHT  +  V FS + +   +A +D+T+K+W+  G    T++    H + V  V FSP+     + S S DRTV++W+  + K  A L GHT  V+    SPDG    S+C  G
Sbjct:  556 LTGHRDGVTSVAISSHKNLIASASRDGTVHLWT-PQGEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDGNLLQTLK---GHQDSVYSVSFSPD--GEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDG 706          

HSP 2 Score: 86.6557 bits (213), Expect = 1.103e-16
Identity = 65/238 (27.31%), Postives = 104/238 (43.70%), Query Frame = 2
Query:   17 KGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS----------------------------------------NCKLKATLAGHTGYVNTVAVSPDG 610
            K  +  H D VT++A    + ++I +ASRD ++ +W         G   R  TGH+  +  V  S +G+   +   D  +++WDL +G   +   GH   V SV+FS D   + S SRDRT++LW+        +  G  HT+ V   +FSP+    T+VS   D  +++W+L                                           ++KATL+GH  +V  V  +PDG
Sbjct:  553 KNVLTGHRDGVTSVAIS-SHKNLIASASRDGTVHLW------TPQGEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDL-DGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGG--HTKSVDDAQFSPD--GQTLVSVCRDGQIRLWDLDGNLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVRLWTPQGEIKATLSGHDEFVTRVVFTPDG 778          
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.850e-18
Identity = 64/202 (31.68%), Postives = 95/202 (47.03%), Query Frame = 2
Query:   47 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631
            +T   TP+++       ++IV  S+  S+ VW L   +       R L GH   V  +     G F  SGS D  ++LWD+       R+ GHT+ V  + FS D + + SAS D ++KLW+ T G+    + E   H   V+ + F PN  +  + S S DRTV+ W+L   +L     G T  V  +  S DG     GG
Sbjct:   59 LTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAK-----ILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCIFCGG 250          
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: SWD3_SCHPO (Set1 complex component swd3 OS=Schizosaccharomyces pombe GN=swd3 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.641e-18
Identity = 48/152 (31.58%), Postives = 83/152 (54.61%), Query Frame = 2
Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            L GH   V  V +S + ++  + S DG +++W     +      GH + +  V ++  ++ + SAS D+TI++W+    C     +G  HT +VS + F+P  L   +VS SWD TV++WNL +      L  H+  + +V++S DG+LCA+
Sbjct:   50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKG--HTNYVSSIDFNP--LGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCAT 197          

HSP 2 Score: 72.7886 bits (177), Expect = 1.649e-12
Identity = 38/118 (32.20%), Postives = 64/118 (54.24%), Query Frame = 2
Query:   77 SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQE 427
            S  + +AS DK+I +W   K       + R L GH+++V  +  +  G   +SGSWD  +R+W+L +G   R    H++ ++SV+ S D     +AS D   ++W+ L G+C  T+ E
Sbjct:  108 SKYLASASDDKTIRIWDFEKR-----CSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVE 220          
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.979e-18
Identity = 55/150 (36.67%), Postives = 85/150 (56.67%), Query Frame = 2
Query:  188 FVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628
            +V+ +  S DG++ ++G+ D +++LWDL+  K    F GH +D+ S+ FS + R IVS S DRT +LW+   G+C  K  I+ G      V+ +  SPN     I   S D+ ++VW++S   L   L GH   V ++A SPD S+  SG
Sbjct:  362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG------VTAIAISPN--DQFIAVGSLDQIIRVWSVSG-TLVERLEGHKESVYSIAFSPDSSILLSG 502          

HSP 2 Score: 88.9669 bits (219), Expect = 2.223e-17
Identity = 59/193 (30.57%), Postives = 98/193 (50.78%), Query Frame = 2
Query:   86 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK------------LKATLAGHTGYVNTVAVSPDGSLCASG 628
            +VT + D+ I +W L+ ++  Y       +GH   +  +  S +G+F +SGS D   RLWD+  G+   + +     V ++A S +++ I   S D+ I++W+  G     ++  + H E V  + FSP++    ++S S D+T+KVW L   +             KAT  GHT +V +VAVSPD     SG
Sbjct:  375 LVTGTEDRQIKLWDLSTQKVRYV-----FSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILK-LEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT---LVERLEGHKESVYSIAFSPDS--SILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSG 556          

HSP 3 Score: 82.4185 bits (202), Expect = 2.081e-15
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 2
Query:   26 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEE-------KTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN 394
            +  H + V +IA   D+S ++++ S DK+I VW L           K  G+ +   TGH+ FV  V +S D ++ LSGS D  ++ WDL  G+S     GH   V+SV FS D RQ  S S D   ++W+
Sbjct:  480 LEGHKESVYSIAFSPDSS-ILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608          
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.702e-17
Identity = 56/220 (25.45%), Postives = 99/220 (45.00%), Query Frame = 2
Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            +++ HTD V  +A       ++ + S D SI +W   +  +      + + GH H V  V     G + LS S D  +++W++A G   + + GH + V  V   I+     + S D+TI++W T   +CK  +++   H   V C+ ++P                      P + S S D+T+++W++S      TL+GH  +V  +A  P G    S
Sbjct:  145 SLKGHTDSVQDVAFDAQGK-LLASCSADLSIKLWDFQQSYECI----KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRD---HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVS 356          

HSP 2 Score: 82.0333 bits (201), Expect = 2.718e-15
Identity = 58/180 (32.22%), Postives = 84/180 (46.67%), Query Frame = 2
Query:  104 DKSIIVWHLTKEEKTYGVARRR------LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625
            +K +I    TK ++T G    R      LTGH   +  V+        +S S D  +R+WD   G+  R   GHT  V  VAF    + + S S D +IKLW+   +    I+    H   VS V F P      ++SAS DRT+K+W ++      T  GH  +V  V V  +GS+ A+
Sbjct:   76 EKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWD-FQQSYECIKTMHGHDHNVSSVAFVP--AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFAT 252          

HSP 3 Score: 75.8702 bits (185), Expect = 1.948e-13
Identity = 60/212 (28.30%), Postives = 102/212 (48.11%), Query Frame = 2
Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSAR---RFVGHTKD-----------VLSVAFSIDNRQ-------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTV 592
            TM  H   V+++A  +   D +++ASRD++I +W     E   G   +  TGH  +V+ V +  +G    + S D  +R+W L   K  +   R   HT +            ++ A   DN++       + S SRD+TI++W+ ++G C  T+     H  WV  + F P      +VSAS D+T++VW+L N +   TL  H  +  ++
Sbjct:  188 TMHGHDHNVSSVAF-VPAGDYVLSASRDRTIKMW-----EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLS---GHDNWVRGLAFHPGGKY--LVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSI 387          

HSP 4 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 52/190 (27.37%), Postives = 85/190 (44.74%), Query Frame = 2
Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 529
            T   H + V  +   I+ S +  T S D++I VW    ++      +  L  H H V+ +  + +                    G F  SGS D  +R+WD++ G       GH   V  +AF    + +VSAS D+TI++W+   + C  T+    AH  + + + F  +   P ++S S D+TVKVW
Sbjct:  230 TYTGHREWVRMVRVHIEGS-IFATCSNDQTIRVWLTNSKD-----CKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLY---AHQHFCTSIDF--HKAHPYVISGSVDQTVKVW 408          
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.903e-17
Identity = 59/186 (31.72%), Postives = 91/186 (48.92%), Query Frame = 2
Query:   80 DMIVTASRDKSIIVWHLTKEE--KTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631
            +++++ S D +I +W L       TY        GH + V DV  +  G + +S S+D   RLW     ++ R FVGH  DV  V F  ++  + + S DRT++LW+ +      +  G  H   VS + FS       + S S D  + +W+LSN  L  TL  HT  V T+  S DG++ A+ G
Sbjct:  463 NLLLSCSEDSTIRLWSLLTWSCVVTY-------RGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTG--HKGSVSSLAFS--ACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAG 637          

HSP 2 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 60/212 (28.30%), Postives = 88/212 (41.51%), Query Frame = 2
Query:   71 DNSDMIVTASRDKSIIVWHLT-----------------KE---------EKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628
            D+S M+     D S+ +W LT                 KE         +   G   R L GH+  V     + +    LS S D  +RLW L        + GH   V  V F+      VS S D+T +LW T  +    ++    H   V CV+F PN+    + + S DRTV++W+    +    + GH G V+++A S  G   ASG
Sbjct:  387 DDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWAT--DSNQALRVFVGHLSDVDCVQFHPNS--NYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASG 594          
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 3.792e-17
Identity = 61/201 (30.35%), Postives = 93/201 (46.27%), Query Frame = 2
Query:   26 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628
            +R H D V       D  D++VT S D ++ VW + K E  Y      L GH+  V    +S  G++ +SGS D  +++W   +G       GHT  V  +A +     +V+ SRD T+++W+           G  H   V CV+F   T    +VS  +D TVK+WN    +   TL GH   V ++    + S+  SG
Sbjct:  251 LRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMY-----TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHG--HHAAVRCVQFDGTT----VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSG 436          

HSP 2 Score: 75.8702 bits (185), Expect = 1.948e-13
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 2
Query:  170 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631
            L GH   V   +   D    ++GS D  L++W + +G+     VGHT  V +   S   R IVS S DRT+K+W+T+ G   +T+Q    HT  V C+  + + L    V+ S D T++VW++ + +  ATL GH   V  V    DG+   SGG
Sbjct:  251 LRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ---GHTSTVRCMAMAGSIL----VTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGG 395          

HSP 3 Score: 72.7886 bits (177), Expect = 1.649e-12
Identity = 55/204 (26.96%), Postives = 88/204 (43.14%), Query Frame = 2
Query:   23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYV--------NTVAVSPD 607
            T++ HT  V  +A       ++VT SRD ++ VW +          R   T H H      +  DG   +SG +D  +++W+   G+  R   GH   V S+ F  +   + S S D +I++W+ T  E +  +     HT   S ++   N L    VS + D  V+VW++        L+GH   +        N VA S D
Sbjct:  333 TLQGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVES-------GRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNIL----VSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSD 522          
The following BLAST results are available for this feature:
BLAST of DN617334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
LIS1_CAEEL1.540e-1830.73Lissencephaly-1 homolog OS=Caenorhabditis elegans ... [more]
UTP13_SCHPO2.011e-1831.55Probable U3 small nucleolar RNA-associated protein... [more]
KTNB1_XENLA2.011e-1831.19Katanin p80 WD40-containing subunit B1 OS=Xenopus ... [more]
Y143_SYNY34.479e-1836.31Uncharacterized WD repeat-containing protein slr01... [more]
KTNB1_XENTR5.850e-1831.68Katanin p80 WD40-containing subunit B1 OS=Xenopus ... [more]
SWD3_SCHPO7.641e-1831.58Set1 complex component swd3 OS=Schizosaccharomyces... [more]
TUP11_SCHPO9.979e-1836.67Transcriptional repressor tup11 OS=Schizosaccharom... [more]
LIS1_DROME1.702e-1725.45Lissencephaly-1 homolog OS=Drosophila melanogaster... [more]
TAF5_DROME2.903e-1731.72Transcription initiation factor TFIID subunit 5 OS... [more]
SEL10_CAEEL3.792e-1730.35F-box/WD repeat-containing protein sel-10 OS=Caeno... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01B03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617334 ID=DN617334; Name=DN617334; organism=Citrus sinensis; type=EST; length=633bp
TGAAGGTCTCGTTCTCAAAGGAACCATGCGCGCCCACACCGACATGGTAA
CGGCGATCGCCACCCCAATCGACAACTCTGACATGATCGTGACGGCCTCG
CGTGACAAGTCCATCATTGTCTGGCACCTCACTAAGGAGGAAAAGACCTA
CGGCGTTGCGCGCCGTCGTTTGACCGGCCACTCTCACTTCGTGCAGGACG
TCGTCCTCTCCTCGGACGGCCAGTTCGCTCTCTCCGGCTCCTGGGACGGC
GAGCTCCGCCTCTGGGATTTGGCCGAGGGCAAATCCGCCCGCAGGTTCGT
CGGCCACACTAAGGACGTTCTCTCCGTCGCCTTCTCGATCGACAACCGTC
AGATTGTATCGGCCTCTCGTGACCGTACGATCAAGTTGTGGAACACGCTC
GGCGAGTGCAAGTACACGATTCAAGAGGGAGACGCTCACACTGAGTGGGT
TTCTTGTGTTAGGTTCAGCCCCAACACGCTTCAGCCCACTATCGTTTCCG
CCTCGTGGGACCGTACGGTCAAAGTGTGGAATTTGAGCAACTGCAAGCTT
AAGGCTACTCTTGCCGGGCACACTGGATACGTGAACACCGTCGCAGTGTC
GCCGGATGGTTCGTTGTGTGCCAGTGGAGGGGA
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