DN617334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: SEL10_CAEBR (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis briggsae GN=sel-10 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.792e-17 Identity = 56/185 (30.27%), Postives = 93/185 (50.27%), Query Frame = 2 Query: 74 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628 ++D++VT S D ++ VW + G + L GHS V +S G++ +SGS D +++W +G GHT V +A + N +V+ SRD T+++W+ E ++ H V CV+F N +VS +D TVK+W+ + K TL GH+ V ++ + S+ SG Sbjct: 267 HNDLLVTGSDDNTLKVWSIDD-----GEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCMAMA--NTTLVTGSRDCTLRVWDI--ETGLHVRTLQGHQAAVRCVQFDGN----IVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSG 438 HSP 2 Score: 75.0998 bits (183), Expect = 3.322e-13 Identity = 54/191 (28.27%), Postives = 91/191 (47.64%), Query Frame = 2 Query: 23 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTV 592 T++ HT V +A + +VT SRD ++ VW + G+ R L GH V+ V DG +SG +D +++WD GK R +GH+ V S+ + + + S S D +I++W+ + E + I HT S ++ N L VS + D V+VW++ L+GH + ++ Sbjct: 335 TLQGHTSTVRCMAMA---NTTLVTGSRDCTLRVWDIET-----GLHVRTLQGHQAAVRCVQF--DGNIVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFSRPEGQELIAFLSGHTSLTSGMQLRGNIL----VSCNADSHVRVWDIYEGTCIHILSGHRSAITSL 511 HSP 3 Score: 69.707 bits (169), Expect = 1.396e-11 Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = 2 Query: 170 LTGHS-HFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631 L GH H + + + +D ++GS D L++W + +G+ GH+ V + S R IVS S DRT+K+W E + + HT V C+ + NT T+V+ S D T++VW++ TL GH V V DG++ SGG Sbjct: 253 LRGHEEHVITCMQIHND--LLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWR--AEDGFLLHTLQGHTSTVRCMAMA-NT---TLVTGSRDCTLRVWDIETGLHVRTLQGHQAAVRCVQF--DGNIVVSGG 397
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.792e-17 Identity = 58/179 (32.40%), Postives = 84/179 (46.93%), Query Frame = 2 Query: 92 TASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 T D+S +W L +E+ GHS V D+ DG A +G D R+WDL G+ GH K++ + FS + I + S D T K+W+ C YTI AH V+ V+F P +++ ++D T K+W TLAGH G V + +S DG L A+ Sbjct: 339 TTCYDRSWRLWDLEAQEEIL-----HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI---PAHQNLVTGVKFEP-IHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 508
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: PRP4_PONAB (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.953e-17 Identity = 58/179 (32.40%), Postives = 84/179 (46.93%), Query Frame = 2 Query: 92 TASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 T D+S +W L +E+ GHS V D+ DG A +G D R+WDL G+ GH K++ + FS + I + S D T K+W+ C YTI AH V+ V+F P +++ ++D T K+W TLAGH G V + +S DG L A+ Sbjct: 339 TTCYDRSWRLWDLEAQEEIL-----HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI---PAHQNLVTGVKFEP-IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 508
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: PRP4_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.953e-17 Identity = 58/179 (32.40%), Postives = 84/179 (46.93%), Query Frame = 2 Query: 92 TASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 T D+S +W L +E+ GHS V D+ DG A +G D R+WDL G+ GH K++ + FS + I + S D T K+W+ C YTI AH V+ V+F P +++ ++D T K+W TLAGH G V + +S DG L A+ Sbjct: 340 TTCYDRSWRLWDLEAQEEIL-----HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI---PAHQNLVTGVKFEP-IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 509
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: PRP4_BOVIN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.953e-17 Identity = 58/179 (32.40%), Postives = 84/179 (46.93%), Query Frame = 2 Query: 92 TASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 T D+S +W L +E+ GHS V D+ DG A +G D R+WDL G+ GH K++ + FS + I + S D T K+W+ C YTI AH V+ V+F P +++ ++D T K+W TLAGH G V + +S DG L A+ Sbjct: 339 TTCYDRSWRLWDLEAQEEIL-----HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI---PAHQNLVTGVKFEP-IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 508
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: WD51A_MOUSE (WD repeat-containing protein 51A OS=Mus musculus GN=Wdr51a PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 6.468e-17 Identity = 63/201 (31.34%), Postives = 96/201 (47.76%), Query Frame = 2 Query: 29 RAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631 RAHT V ++ D + VTAS DK++ VW ++ + LT H ++V+ S DG+ +S S D ++LWD + + H V V F I +A D T+K+W+ +Q H+ V+ + F P+ +++AS D T+K+ +L +L TL GH G TVA S G ASGG Sbjct: 100 RAHTATVRSVHFCSDGQSL-VTASDDKTVKVWSTHRQRFLFS-----LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDA--RTHRLLQHYQLHSAAVNALSFHPSGNY--LITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290 HSP 2 Score: 80.1073 bits (196), Expect = 1.033e-14 Identity = 68/243 (27.98%), Postives = 100/243 (41.15%), Query Frame = 2 Query: 14 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSV------------------------------------------AFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGS 613 L+ + H D VT + + N+ + + S D ++++WH+ + + Y R TGH V V S G SGS D +R+W + F HT V SV FS D R IVSAS D+T+KLW+ T EC ++ E H +V+ V F P+ I +A D TVKVW+ +L H+ VN ++ P G+ Sbjct: 11 LERHFKGHRDAVTCVDFSL-NTKHLASGSMDSTLMIWHMKPQSRAY-----RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE---HGGFVTYVDFHPS--GTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGN 242 HSP 3 Score: 80.1073 bits (196), Expect = 1.033e-14 Identity = 54/156 (34.62%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 164 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLW--NTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 R GH V V S + + SGS D L +W + A RF GH V V FS + S SRD+T+++W N GE AHT V V F + ++V+AS D+TVKVW+ + +L H +V SPDG L S Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF----RAHTATVRSVHFCSD--GQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVS 162
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: GBLP_ENCCU (Guanine nucleotide-binding protein subunit beta-like protein OS=Encephalitozoon cuniculi GN=ECU08_1110 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.468e-17 Identity = 58/186 (31.18%), Postives = 96/186 (51.61%), Query Frame = 2 Query: 26 MRAHTDMVTAIA-TPIDNSDMIVTASRDKSIIVWHL-TKEEKTYG-VARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE--CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAG 568 + H D V + + +++ ++SRDK + W L +K + +G + + GHS + + +S DG ++ DG R+WD E K + GH +DVL V+ + ++ +IV+ S DRT+ L+NT G+ K H W++CV F P T + + S S D TVK+W+L + T G Sbjct: 12 LNGHKDEVKGLKIVRVSGREILYSSSRDKKVFSWDLHSKIDSEFGKILKLYDGGHSKRINGLDVSKDGNMMVTVGSDGIGRIWD-TESKKSILLEGHGRDVLCVSINSNDTKIVTGSVDRTMNLYNTKGDLVLKMGRDMEMMHRGWINCVTFHP-TEESILASGSADGTVKIWDLDTQEHLQTYLG 195
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: MET30_YEAST (F-box protein MET30 OS=Saccharomyces cerevisiae GN=MET30 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.448e-17 Identity = 60/186 (32.26%), Postives = 98/186 (52.69%), Query Frame = 2 Query: 74 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVV-LSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 N+D+ +R +I K E + R+ + V+ L + + +GS+D + +WDL GK RR GH+ V ++ F D+R++++ S D+TI++WN + GEC T + H++ V S ++ Q IVS S D+TVKVW++ + + TL GHT +VN V + P C S Sbjct: 263 NADIQTQTTRPWKVIYRERFKVESNWRKGHCRIQEFKGHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYITGECISTYR---GHSDSV----LSVDSYQKVIVSGSADKTVKVWHVES-RTCYTLRGHTEWVNCVKLHPKSFSCFS 438
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: KTNB1_ARATH (Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 8.448e-17 Identity = 58/199 (29.15%), Postives = 88/199 (44.22%), Query Frame = 2 Query: 32 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628 AH+ V + +S ++VT D + +W + K A L GHS + V + +G+ G ++LWDL E K R GH + +SV F S S D +K+W+ K I HT V+ +RF+P+ +VS D VKVW+L+ KL H G + ++ P L A+G Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPN-----AILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI--RKKGCIHTYKGHTRGVNVLRFTPD--GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATG 203 HSP 2 Score: 78.5666 bits (192), Expect = 3.005e-14 Identity = 55/188 (29.26%), Postives = 88/188 (46.81%), Query Frame = 2 Query: 71 DNSDMIVTASRDKSII-VWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASG 628 D S+++V A I +W L + + R LTGH V G+F SGS D L++WD+ + + GHT+ V + F+ D R +VS D +K+W+ T G+ + E +H + + F P+ + + S DRTVK W+L +L + T V ++ +PDG G Sbjct: 68 DASEVLVAAGAASGTIKLWDLEEAKIV-----RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK---LLTEFKSHEGQIQSLDFHPHEF--LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCG 245
BLAST of DN617334 vs. ExPASy Swiss-Prot
Match: WD51A_BOVIN (WD repeat-containing protein 51A OS=Bos taurus GN=WDR51A PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.441e-16 Identity = 62/201 (30.85%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 29 RAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCASGG 631 RAHT V ++ D VTAS DK++ VW +++ + +++ H ++V+ S DG+ +S S D ++LWD + + H V V F I +A D T+K+W+ +Q H+ V+ + F P+ +V+AS D T+K+ +L +L TL GH G TVA S G ASGG Sbjct: 100 RAHTATVRSVHFCSDGQSF-VTASDDKTVKVWSTHRQKFLFSLSQ-----HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV--RTHRLLQHYQLHSAAVNALSFHPSGNY--LVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290 HSP 2 Score: 80.4925 bits (197), Expect = 7.907e-15 Identity = 62/195 (31.79%), Postives = 93/195 (47.69%), Query Frame = 2 Query: 35 HTDMVTAIATPIDNSDMIVTASRDKSIIVW-HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGS 613 H D VT + + ++ + SRDK++ +W K E T H+ V+ V SDGQ ++ S D +++W K H V FS D R IVSAS D+T+KLW+ T EC ++ E H +V+ V F P+ I +A D TVKVW++ +L H+ VN ++ P G+ Sbjct: 60 HKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNVKGESTV------FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE---HGGFVTYVDFHPS--GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN 242 HSP 3 Score: 79.337 bits (194), Expect = 1.761e-14 Identity = 55/156 (35.26%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 164 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLW--NTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLKATLAGHTGYVNTVAVSPDGSLCAS 625 R GH V V S + + SGS D L +W + A RF GH V V FS + S SRD+T+++W N GE AHT V V F + + V+AS D+TVKVW+ K +L+ H +V SPDG L S Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF----RAHTATVRSVHFCSD--GQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVS 162 The following BLAST results are available for this feature:
BLAST of DN617334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617334 ID=DN617334; Name=DN617334; organism=Citrus sinensis; type=EST; length=633bpback to top |