DN617328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_METMP (30S ribosomal protein S3Ae OS=Methanococcus maripaludis GN=rps3Ae PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 52/194 (26.80%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 139 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 720 WYDI P F G ++ +T A+ L R+ E+SL DL NE ++ + + V G N + F G T + L+S VR+ + I A V+V+T D F +R+ + T A+ +IR +M +I+ A V + +G +I ++PL+ V I K ++++ K Sbjct: 24 WYDIYTPQSF-----GGDVIGQTPANDPAN--LIGRISEISLRDLTNEHSKHMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLT---------AVRARDHHKTEIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYGDCKKMFPLKRVEIFKSEVIEFGK 201
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_IGNH4 (30S ribosomal protein S3Ae OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 52/193 (26.94%), Postives = 82/193 (42.49%), Query Frame = 1 Query: 139 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 717 WY+I P F +VG+T + K+ + +++++ GD H Y +++ D + T F G D +RSL R+ + IE DV T D + LR+ FT QTSQ R IR+ +E++ L ++ + I EI IYP++ I K K+L P Sbjct: 18 WYEIITPDVFNNVSVGQT--PADEAWKLIGRTVDTTLYDIT-GDFTYVHVHVY--LQINKVDEEALKAYTIFKGHELARDYIRSLTRRKSSKIEGIFDVWTKDGYGLRITVDTFT---------AYRCQTSQKRAIRKIQKEVIEEMVPQMTLDEVINAMLFGDIAEEISNRARKIYPIRRTEIYKSKVLYMP 196 The following BLAST results are available for this feature:
BLAST of DN617328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617328 ID=DN617328; Name=DN617328; organism=Citrus sinensis; type=EST; length=728bpback to top |