DN617328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_CAEBR (40S ribosomal protein S3a OS=Caenorhabditis briggsae GN=rps-1 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.079e-64 Identity = 125/197 (63.45%), Postives = 149/197 (75.63%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +WYDIKAP+ F R VGKTL+ RTQGTKIASEGLK RVFEVSLGDL N E +RK +L AEDVQGKNVLTNF MS T DKL S+V+KWHTLIEA VKTTD +TLR+F I FTK+ NQVK+T Y +TS+IR+IR +M + + CDLK +V K I + IG++IEK S +YPLQ V+IRKVKI+K PK D Sbjct: 27 EWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL-NNSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSANQVKKTSYTKTSKIRKIRSEMISCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKID 222
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_BABBO (40S ribosomal protein S3a OS=Babesia bovis GN=BBOV_III001480 PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.841e-64 Identity = 115/197 (58.38%), Postives = 157/197 (79.70%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +WY +KAP F VRN G+TLV++TQGTK+A++GL+ R++EVSL DL +E+ +YRKI+L ED+QG+N LTNF G S T DKL SL+RK ++LIEA+ DVKTTD +TLR+FCIG+TKR P Q+K TCY ++S+ R +RRKM E+M +A++ ++ +V+K I E IG+EIEKA S++PLQNV IRK+K+LK PKFD Sbjct: 28 EWYTLKAPVMFHVRNFGQTLVSKTQGTKLATDGLRGRIYEVSLADLNADEDQSYRKIKLCCEDIQGRNCLTNFHGTSVTRDKLCSLIRKNYSLIEAFTDVKTTDGYTLRMFCIGYTKRRPGQLKSTCYIRSSRTRVVRRKMIEVMQREASTTSMREVVKKIIPESIGKEIEKACKSVFPLQNVLIRKIKVLKKPKFD 224
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A2_DEBHA (40S ribosomal protein S1-B OS=Debaryomyces hansenii GN=RPS1B PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.841e-64 Identity = 118/197 (59.90%), Postives = 154/197 (78.17%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +W+DIKAPS F R VGKTL+ R+ G K A++GLK RV EV L DL E+H+ RK++LR ++VQGKN+LTNF G+ FTTDKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR NQ+++T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T +I PLQN+ IRKVK+LK PKFD Sbjct: 28 EWFDIKAPSTFENRAVGKTLINRSTGLKNAADGLKGRVVEVCLADLQGSEDHSSRKVKLRVDEVQGKNLLTNFHGIDFTTDKLRSLVRKWQSLVEANVTVKTSDDYVLRIFAIAFTKRQANQIRKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTILPLQNIHIRKVKLLKQPKFD 224
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A1_DEBHA (40S ribosomal protein S1-A OS=Debaryomyces hansenii GN=RPS1A PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.841e-64 Identity = 118/197 (59.90%), Postives = 154/197 (78.17%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +W+DIKAPS F R VGKTL+ R+ G K A++GLK RV EV L DL E+H+ RK++LR ++VQGKN+LTNF G+ FTTDKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR NQ+++T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T +I PLQN+ IRKVK+LK PKFD Sbjct: 28 EWFDIKAPSTFENRAVGKTLINRSTGLKNAADGLKGRVVEVCLADLQGSEDHSSRKVKLRVDEVQGKNLLTNFHGIDFTTDKLRSLVRKWQSLVEANVTVKTSDDYVLRIFAIAFTKRQANQIRKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTILPLQNIHIRKVKLLKQPKFD 224
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_BRUMA (40S ribosomal protein S3a OS=Brugia malayi GN=Bm1_27225 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.404e-64 Identity = 126/197 (63.96%), Postives = 152/197 (77.16%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +WYDIKAPS F V+++GKTLV RTQGTKIASEGLK RV+EVSLGDL N E +RK+RL EDVQG+ LTNF GM T DKL S+V+KWHTLIEA V VKT+D + LRLFCIGFTK+ Q+K+T YA++S+IRQIR KM E M + DLK + K + + IG++IEKA S IYPLQ+V IRKVKILK PKF+ Sbjct: 26 EWYDIKAPSMFNVQHIGKTLVNRTQGTKIASEGLKGRVYEVSLGDL-NNAESEFRKMRLICEDVQGRTCLTNFHGMRLTRDKLCSIVKKWHTLIEANVAVKTSDGYLLRLFCIGFTKKNARQLKKTSYAKSSKIRQIRAKMVEYMQKEVQGSDLKDVCHKLVPDSIGKDIEKACSYIYPLQDVCIRKVKILKKPKFE 221
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_USTMA (40S ribosomal protein S1 OS=Ustilago maydis GN=RPS1 PE=3 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 3.140e-64 Identity = 119/197 (60.41%), Postives = 151/197 (76.65%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 DWYDIKAP+ F RNVGKT V R+QG K A + LK R+ E SL DL ++E AYRK +L+ + +QG+ LTNF+GM FT+DKLRSLVRKW +LIEA+ DVKTTD + LR+F I FTK+ NQVK+ YA++S IR IR+KM EI+ +A SCDL+ V K I EVIGRE+EKAT I+PL++V++RKVK+LKAPK D Sbjct: 27 DWYDIKAPTFFENRNVGKTFVNRSQGLKNADDSLKGRIVEASLADLNKDDEQAYRKFKLKVDGIQGRTCLTNFYGMDFTSDKLRSLVRKWQSLIEAHQDVKTTDGYLLRVFVIAFTKKRANQVKKNTYAKSSHIRAIRQKMFEIVQREANSCDLREFVAKLIPEVIGREVEKATQGIFPLKDVYVRKVKVLKAPKDD 223
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_THEPA (40S ribosomal protein S3a OS=Theileria parva GN=TP03_0697 PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.140e-64 Identity = 118/197 (59.90%), Postives = 154/197 (78.17%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +WY++KAP F VRN G+TLVT+T GTK+A++GLK RVFE+SL DL +E+ AYRKI+L EDVQG+N LT+F G S T DKL SL+RK ++LIEA+ DVKT D + LRLFC+G+TKR P Q+K TCY +TS++R I +KM +M +A++ LK LV+K I E IG+EIEKA SI+PLQNV +RK+K+LK PKFD Sbjct: 28 EWYNLKAPVTFNVRNFGQTLVTKTVGTKLATDGLKGRVFEMSLADLNADEDQAYRKIKLSCEDVQGRNCLTDFHGTSVTRDKLCSLIRKNYSLIEAFADVKTLDGYNLRLFCVGYTKRRPGQLKSTCYVRTSKVRLIHKKMVSVMTNEASNSTLKELVKKVIPESIGKEIEKACKSIFPLQNVLVRKIKVLKKPKFD 224
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_CAEEL (40S ribosomal protein S3a OS=Caenorhabditis elegans GN=rps-1 PE=1 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 3.140e-64 Identity = 125/197 (63.45%), Postives = 149/197 (75.63%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +WYDIKAP+ F R VGKTL+ RTQGTKIASEGLK RVFEVSLGDL N E +RK +L AEDVQGKNVLTNF MS T DKL S+V+KWHTLIEA VKTTD +TLR+F I FTK+ NQVK+T Y +TS+IR+IR +M + + CDLK +V K I + IG++IEK S +YPLQ V+IRKVKI+K PK D Sbjct: 27 EWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL-NNSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVD 222
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_ARTSF (40S ribosomal protein S3a OS=Artemia sanfranciscana PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.355e-64 Identity = 122/199 (61.31%), Postives = 152/199 (76.38%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE--HAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 DWYD+KAPS F R++GKTLV RT GTKIAS+ LK RVFEVSL DL E E ++RK RL AE+VQG+ +LTNF GM FTTDKLRSLV+KW TLIE VDVKTTD++ LR+FCIGFT++ ++TCYAQ +Q+R IR+KM EI+ + +S DLK V K I + I ++IEK+ SIYP+ V+IRKVK+LK PKFD Sbjct: 29 DWYDVKAPSLFTNRDIGKTLVNRTAGTKIASDSLKGRVFEVSLADLQGESEAERSFRKFRLIAEEVQGRYLLTNFHGMDFTTDKLRSLVKKWQTLIECSVDVKTTDSYLLRVFCIGFTQKDQRSQRKTCYAQHTQVRAIRKKMTEIITKEISSGDLKEAVSKLIPDSIAKDIEKSCHSIYPIHEVYIRKVKVLKKPKFD 227
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_PICPG (40S ribosomal protein S1 OS=Pichia pastoris (strain GS115) GN=RPS1 PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.994e-64 Identity = 119/197 (60.41%), Postives = 150/197 (76.14%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +WYDIKAP+ F RNVGKTL+ ++ G K A +GLK RV EVSL DL E+H+++KI+LR ++VQGKN+LTNF G FT+DK+RSLVRKW +L+EA V VKT D++ LR+FCI FT+R NQ+K+T YAQ+SQ+ IR+KM EIM + ++ L L K I EVIGREIEKA IYPLQNV IRKVK+LK KFD Sbjct: 28 EWYDIKAPTTFENRNVGKTLINKSTGLKNAVDGLKGRVVEVSLADLQGSEDHSFKKIKLRVDEVQGKNLLTNFHGFDFTSDKVRSLVRKWQSLVEANVTVKTADDYVLRIFCIAFTRRHQNQIKKTTYAQSSQLSAIRKKMVEIMQREVSNVTLAQLTSKLIPEVIGREIEKAAEGIYPLQNVHIRKVKVLKQAKFD 224 The following BLAST results are available for this feature:
BLAST of DN617328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617328 ID=DN617328; Name=DN617328; organism=Citrus sinensis; type=EST; length=728bpback to top |