DN617315

Overview
NameDN617315
Unique NameDN617315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1124 contig Csv1_Contig1124:11..538. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: METC_LACLM (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metC PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.670e-22
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = -2
Query:  144 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 527
            +  ++ A ++A+ LE    V +V+YPGL SHP H IA +QM+ FGG++SFE+  D  A   F++ L    +A S GG ES+++ PA+M++  + +  R + GI D L+R S GVE  EDL  D+ +AL
Sbjct:  251 EAHSANAQKIAEFLETSKAVSKVYYPGLNSHPGHEIAKKQMSAFGGMISFELT-DENAVKDFVENLSYFTLAESLGGVESLIEVPAVMTHASIPKELREEIGIKDGLIRLSVGVEAIEDLLTDIKEAL 377          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: METC_LACLA (Cystathionine beta-lyase OS=Lactococcus lactis subsp. lactis GN=metC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.670e-22
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = -2
Query:  144 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 527
            +  ++ A ++A+ LE    V +V+YPGL SHP H IA +QM+ FGG++SFE+  D  A   F++ L    +A S GG ES+++ PA+M++  + +  R + GI D L+R S GVE  EDL  D+ +AL
Sbjct:  251 EAHSANAQKIAEFLETSKAVSKVYYPGLNSHPGHEIAKKQMSAFGGMISFELT-DENAVKDFVENLSYFTLAESLGGVESLIEVPAVMTHASIPKELREEIGIKDGLIRLSVGVEAIEDLLTDIKEAL 377          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: MEGL_PSEPU (Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 4.554e-22
Identity = 53/121 (43.80%), Postives = 79/121 (65.29%), Query Frame = -2
Query:  138 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 500
            +A+ L   P+V+ +HYPGL S P++ +A QQM+  GG+++FE+ G + A  +F++AL++   A S G  ES+   PA M++   +  ER  YGI + LVR S G+ED +DL ADV QAL A
Sbjct:  276 LAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: METC_LACLC (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris GN=metC PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.767e-22
Identity = 53/128 (41.41%), Postives = 82/128 (64.06%), Query Frame = -2
Query:  144 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 527
            +  ++ A ++A+ LEA   V +V+YPGL +H  H IA +QMT FGG++SFE+  D  A   F++ L+   +A S GG ES+++ PA+M++  + +  R + GI D L+R S GVE  EDL  D+ +AL
Sbjct:  251 EAHSANAQKIAEFLEASQAVSKVYYPGLVNHEGHEIAKKQMTAFGGMISFELT-DENAVKNFVENLRYFTLAESLGGVESLIEVPAVMTHASIPKELREEIGIKDGLIRLSVGVEALEDLLTDLKEAL 377          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: CGL_MOUSE (Cystathionine gamma-lyase OS=Mus musculus GN=Cth PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.767e-22
Identity = 52/123 (42.28%), Postives = 80/123 (65.04%), Query Frame = -2
Query:  138 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 506
            + +A+ LE +P+V++V YPGL SHP+H +A +Q +G  G+VSF + G L     F+  LK+  +A S GG ES+ + PAIM++  + + +R   GI D L+R S G+ED +DL  D+ +AL A
Sbjct:  273 MAVARFLETNPRVEKVVYPGLPSHPQHELAKRQCSGCPGMVSFYIKGALQHAKAFLKNLKLFTLAESLGGYESLAELPAIMTHASVPEKDRATLGINDTLIRLSVGLEDEQDLLEDLDRALKA 395          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: CGL_MACFA (Cystathionine gamma-lyase OS=Macaca fascicularis GN=CTH PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.014e-21
Identity = 53/123 (43.09%), Postives = 82/123 (66.67%), Query Frame = -2
Query:  138 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 506
            + +A+ LE++P V++V YPGL SHP+H +A +Q TG  G+++F + G L     F+  LK+  +A S GG ES+V+ PAIM++  + +++R   GI D L+R S G+ED +DL  D+ QAL A
Sbjct:  274 MAVAQFLESNPGVEKVIYPGLPSHPQHELAKRQCTGCTGMITFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLVELPAIMTHASVPKNDRDVLGISDTLIRLSVGLEDEKDLLEDLDQALKA 396          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: MCCB_BACSU (Cystathionine gamma-lyase OS=Bacillus subtilis GN=mccB PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.325e-21
Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = -2
Query:  135 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 518
            +  A ++A  LE HP V+ ++YPG  +HP H +A  Q  GFGG++SF++ G       F+  LK+  IA S G  ES++  PA M++  + +  RL+ GI D L+R S G+ED EDL  D+ QAL  I
Sbjct:  253 DQNARKIASFLENHPAVQTLYYPGSSNHPGHELAKTQGAGFGGMISFDI-GSEERVDAFLGNLKLFTIAESLGAVESLISVPARMTHASIPRERRLELGITDGLIRISVGIEDAEDLLEDIGQALENI 379          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: METC_BACSU (Cystathionine beta-lyase metC OS=Bacillus subtilis GN=metC PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.730e-21
Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = -2
Query:  135 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 527
            ++ + TA R+A+  + HP VKRV+YPGL  HP       Q TG G V+SFE++    A  K ++ + +P  A S G  ESI+  PA MS+  + + ER K GI D L+R S GVE  +DL+ D  QAL  I
Sbjct:  255 EKASQTAQRLAEFFQKHPAVKRVYYPGLADHPGAETHKSQSTGAGAVLSFELESK-EAVKKLVENVSLPVFAVSLGAVESILSYPATMSHAAMPKEEREKRGITDGLLRLSVGVEHADDLEHDFEQALKEI 384          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: CGL_HUMAN (Cystathionine gamma-lyase OS=Homo sapiens GN=CTH PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 3.855e-21
Identity = 53/123 (43.09%), Postives = 80/123 (65.04%), Query Frame = -2
Query:  138 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 506
            + +A+ LE++P V++V YPGL SHP+H +  +Q TG  G+V+F + G L     F+  LK+  +A S GG ES+ + PAIM++  + +++R   GI D L+R S G+ED EDL  D+ QAL A
Sbjct:  274 MAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 396          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: METB_MYCLE (Cystathionine gamma-synthase OS=Mycobacterium leprae GN=metB PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.499e-20
Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = -2
Query:  141 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 527
            Q+ N  A+ +A+ L  HP V  V YPGL SHP H +A +QM GFGG+VS  +     A        K+  +A S GG ES+++QP+ M++   + S+     + D+LVR S G+ED  DL  D+ QAL+
Sbjct:  263 QRHNENAITVAEFLAGHPSVSAVLYPGLPSHPGHEVAARQMRGFGGMVSLRMRAGRLAAQDLCARTKVFTLAESLGGVESLIEQPSAMTHASTTGSQ---LEVPDDLVRLSVGIEDVGDLLCDLKQALN 388          
The following BLAST results are available for this feature:
BLAST of DN617315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
METC_LACLM2.670e-2241.41Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METC_LACLA2.670e-2241.41Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
MEGL_PSEPU4.554e-2243.80Methionine gamma-lyase OS=Pseudomonas putida GN=md... [more]
METC_LACLC7.767e-2241.41Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
CGL_MOUSE7.767e-2242.28Cystathionine gamma-lyase OS=Mus musculus GN=Cth P... [more]
CGL_MACFA1.014e-2143.09Cystathionine gamma-lyase OS=Macaca fascicularis G... [more]
MCCB_BACSU1.325e-2141.41Cystathionine gamma-lyase OS=Bacillus subtilis GN=... [more]
METC_BACSU1.730e-2142.75Cystathionine beta-lyase metC OS=Bacillus subtilis... [more]
CGL_HUMAN3.855e-2143.09Cystathionine gamma-lyase OS=Homo sapiens GN=CTH P... [more]
METB_MYCLE2.499e-2040.31Cystathionine gamma-synthase OS=Mycobacterium lepr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617315 ID=DN617315; Name=DN617315; organism=Citrus sinensis; type=EST; length=528bp
TTTAAGATTATTCCAAGGATTATTTGTCACTAAAACATAATAACAAAACG
AACATATTCAAACATCAAAAGAGAATGCCGTTAGGAAAAGTAAAATGAAA
AATTTGCGAAGGTGAAACACAAAAAACACTTCTATATGGCGTGCAGGGCC
TGAAGTACATCAGCCTTCAAATCTTCAAAATCTTCCACTCCAAAGCTAAA
GCGAACCAAGTTATCCATAATCCCATACTTGAGCCTCTCCGATTGGCTAA
GGTCCCAATACGACATTATAGCTGGCTGATCAACAATGCTCTCACAGCCA
CCGAAGGATGGAGCAATATATGGGATTTTCAAGGCATCAATAAATTTTAT
GGTGGCCGTTAGGTCTCCATCAACCTCAAAACTAACTACCCCACCAAAAC
CAGTCATTTGCTGTGTGGCAATGTGATGCTCAGGATGACTCTTCAAGCCT
GGATAGTGAACGCGCTTCACCTTTGGATGTGCCTCTAAAATCTTGGCCAT
CCTCAACGCAGTTGAATTTTGTTGCTGT
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