DN617315

Overview
NameDN617315
Unique NameDN617315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1124 contig Csv1_Contig1124:11..538. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: METB_MYCTU (Cystathionine gamma-synthase OS=Mycobacterium tuberculosis GN=metB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.339e-18
Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = -2
Query:  144 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 527
            Q+ +  A  +A+ L  HP V  V YPGL SHP H IA +QM GFGG+VS  +     A        ++  +A S GG ES+++ P+ M++   + S+     + D+LVR S G+ED  DL  D+ QAL
Sbjct:  263 QRHSENACAVAEFLADHPSVSSVLYPGLPSHPGHEIAARQMRGFGGMVSVRMRAGRRAAQDLCAKTRVFILAESLGGVESLIEHPSAMTHASTAGSQ---LEVPDDLVRLSVGIEDIADLLGDLEQAL 387          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: METB_MYCBO (Cystathionine gamma-synthase OS=Mycobacterium bovis GN=metB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.339e-18
Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = -2
Query:  144 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 527
            Q+ +  A  +A+ L  HP V  V YPGL SHP H IA +QM GFGG+VS  +     A        ++  +A S GG ES+++ P+ M++   + S+     + D+LVR S G+ED  DL  D+ QAL
Sbjct:  263 QRHSENACAVAEFLADHPSVSSVLYPGLPSHPGHEIAARQMRGFGGMVSVRMRAGRRAAQDLCAKTRVFILAESLGGVESLIEHPSAMTHASTAGSQ---LEVPDDLVRLSVGIEDIADLLGDLEQAL 387          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: METB_ECOLI (Cystathionine gamma-synthase OS=Escherichia coli (strain K12) GN=metB PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.339e-18
Identity = 48/129 (37.21%), Postives = 75/129 (58.14%), Query Frame = -2
Query:  138 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 524
            Q+N+ A+   K L+  P VK++++P L  +  H IA +Q  GFG ++SFE+DGD     +F+  L +  +A S GG ES++   A M++  ++   R   GI + L+R S G+ED EDL AD+     A
Sbjct:  256 QRNAQAI--VKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRA 382          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: METC_ARATH (Cystathionine beta-lyase, chloroplastic OS=Arabidopsis thaliana GN=At3g57050 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.887e-18
Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = -2
Query:  156 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 527
            ++Q   A ++A  L +HP+VK+V+Y GL  HP HH+   Q  G G V SF + G +  +   ++  K   IA SFG  +S++  P  MS+  +    R   G+ ++LVR S G+ED +DL +D+
Sbjct:  333 EKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSF-ITGSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDL 455          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: CYS3_YEAST (Cystathionine gamma-lyase OS=Saccharomyces cerevisiae GN=CYS3 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 2.586e-17
Identity = 48/131 (36.64%), Postives = 79/131 (60.31%), Query Frame = -2
Query:  144 QQQNSTALRMAKILEAHPK-VKRVHYPGLKSHPEHHIATQQMTGF--GGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 527
            +Q   +A ++A+ L A  + V  V+YPGLK+HP + +  +Q      GG++SF + G   A  KF  + ++  +A S GG ES+++ PA+M++  + +  R   G+ D+LVR S G+ED +DL  D+ QAL
Sbjct:  259 RQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQAL 389          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: CYSD_SCHPO (O-acetylhomoserine (thiol)-lyase OS=Schizosaccharomyces pombe GN=SPBC428.11 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.826e-17
Identity = 45/123 (36.59%), Postives = 72/123 (58.54%), Query Frame = -2
Query:  144 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 509
            A  +AK LE HPKV  V YPGL+SH  H +A + +  G+G V+SF   G    + K ++ALK+     + G  +++V  PA  ++  L+  E++  G+  +L+R + G+E  +D+ AD  QAL
Sbjct:  304 AFALAKYLEKHPKVNWVSYPGLESHVSHKLAKKYLKNGYGAVLSFGAKGGPDQSRKVVNALKLASQLANVGDAKTLVIAPAYTTHLQLTDEEQISAGVTKDLIRVAVGIEHIDDIIADFAQAL 426          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: CYSA_STRCO (Putative cystathionine gamma-lyase OS=Streptomyces coelicolor GN=cysA PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.201e-14
Identity = 48/130 (36.92%), Postives = 74/130 (56.92%), Query Frame = -2
Query:  144 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG---IMDNLVRFSFGVEDFEDLKADVLQAL 524
            +Q+STAL++A+ L   P++  + YPGL   P H +A+QQM  +G VVSF +     A  +F+DAL++   A SFGG  S  ++             R ++G   + +  +R S G ED +DL AD+L+AL
Sbjct:  272 RQDSTALKVAEALRTRPEITGLRYPGLPDDPSHKVASQQMLRYGCVVSFTLPSRARAD-RFLDALRLVEGATSFGGVRSTAER-------------RGRWGGDAVPEGFIRLSVGAEDPDDLVADLLRAL 387          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: METB_HAEIN (Cystathionine gamma-synthase OS=Haemophilus influenzae GN=metB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.676e-14
Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = -2
Query:  147 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQA 524
            Q+N+ A+  A+ L+A P+V+ V YP                  GG++SF +  +      F+ ++K+   A S GG ES +  PA  ++ D+ +SER+  GI + L+RFS G+ED ED+KAD+LQA
Sbjct:  258 QENAQAI--AEFLKAQPQVESVLYPNK----------------GGMLSFRLQDEAWVNT-FLKSIKLITFAESLGGTESFITYPATQTHMDIPESERVARGITNTLLRFSVGIEDVEDIKADLLQA 364          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: MET17_YEAST (Protein MET17 OS=Saccharomyces cerevisiae GN=MET17 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 3.864e-13
Identity = 45/142 (31.69%), Postives = 73/142 (51.41%), Query Frame = -2
Query:  135 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT-GFGGVVSF----------EVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 527
            ++    AL++AK LE  P V  V YPGL SH  H  A + ++ GFGGV+SF          E D    +  + +D LK+     + G  +++V  P   ++  L+  E+L  G+  +L+R S G+E  +D+ AD  Q+   +
Sbjct:  297 ERHGENALKLAKWLEQSPYVSWVSYPGLASHSHHENAKKYLSNGFGGVLSFGVKDLPNADKETDPFKLSGAQVVDNLKLASNLANVGDAKTLVIAPYFTTHKQLNDKEKLASGVTKDLIRVSVGIEFIDDIIADFQQSFETV 438          
BLAST of DN617315 vs. ExPASy Swiss-Prot
Match: MET17_KLULA (Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=3 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 2.505e-12
Identity = 44/134 (32.84%), Postives = 70/134 (52.24%), Query Frame = -2
Query:  159 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSF----------EVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKAD 527
            ++  S AL++A+ LE+ P V  V YPGL SH  H  A + +  GFGGV+SF          E D    +  + +D LK+     + G  +++V  P   ++  L+  E+L  G+  +L+R S G E  +D+ AD
Sbjct:  296 ERHGSNALKLAQYLESSPYVSWVSYPGLPSHSHHENAKKYLENGFGGVLSFGVKDLPNASEESDPFKASGAQVVDNLKLASNLANVGDSKTLVIAPYFTTHQQLTDEEKLASGVTKDLIRVSVGTEFIDDIIAD 429          
The following BLAST results are available for this feature:
BLAST of DN617315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
METB_MYCTU2.339e-1839.06Cystathionine gamma-synthase OS=Mycobacterium tube... [more]
METB_MYCBO2.339e-1839.06Cystathionine gamma-synthase OS=Mycobacterium bovi... [more]
METB_ECOLI2.339e-1837.21Cystathionine gamma-synthase OS=Escherichia coli (... [more]
METC_ARATH8.887e-1836.29Cystathionine beta-lyase, chloroplastic OS=Arabido... [more]
CYS3_YEAST2.586e-1736.64Cystathionine gamma-lyase OS=Saccharomyces cerevis... [more]
CYSD_SCHPO9.826e-1736.59O-acetylhomoserine (thiol)-lyase OS=Schizosaccharo... [more]
CYSA_STRCO1.201e-1436.92Putative cystathionine gamma-lyase OS=Streptomyces... [more]
METB_HAEIN2.676e-1436.51Cystathionine gamma-synthase OS=Haemophilus influe... [more]
MET17_YEAST3.864e-1331.69Protein MET17 OS=Saccharomyces cerevisiae GN=MET17... [more]
MET17_KLULA2.505e-1232.84Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617315 ID=DN617315; Name=DN617315; organism=Citrus sinensis; type=EST; length=528bp
TTTAAGATTATTCCAAGGATTATTTGTCACTAAAACATAATAACAAAACG
AACATATTCAAACATCAAAAGAGAATGCCGTTAGGAAAAGTAAAATGAAA
AATTTGCGAAGGTGAAACACAAAAAACACTTCTATATGGCGTGCAGGGCC
TGAAGTACATCAGCCTTCAAATCTTCAAAATCTTCCACTCCAAAGCTAAA
GCGAACCAAGTTATCCATAATCCCATACTTGAGCCTCTCCGATTGGCTAA
GGTCCCAATACGACATTATAGCTGGCTGATCAACAATGCTCTCACAGCCA
CCGAAGGATGGAGCAATATATGGGATTTTCAAGGCATCAATAAATTTTAT
GGTGGCCGTTAGGTCTCCATCAACCTCAAAACTAACTACCCCACCAAAAC
CAGTCATTTGCTGTGTGGCAATGTGATGCTCAGGATGACTCTTCAAGCCT
GGATAGTGAACGCGCTTCACCTTTGGATGTGCCTCTAAAATCTTGGCCAT
CCTCAACGCAGTTGAATTTTGTTGCTGT
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