DN617310

Overview
NameDN617310
Unique NameDN617310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER2_HYONI (Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.532e-32
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = -1
Query:  195 AVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 479
            A YKVKL+ PDG   EFD PDD YILD AE+ G ELPYSCRAG+CS+CAG + +G+VDQSDG+FLDD+QM  G+VLTC+AYP+SD  I THKE +
Sbjct:    1 ATYKVKLVTPDGPV-EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVKAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEED 94          
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_TOBAC (Ferredoxin OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.640e-32
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = -1
Query:  195 AVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 479
            A YKVKLI P+G   EFD PDD YILD AE+ G +LPYSCRAG+CS+CAG + +G+VDQSDG+FLDD+QM  G+VLTC+AYP+SD  I THKE E
Sbjct:    1 ASYKVKLITPEGAV-EFDCPDDVYILDQAEEMGHDLPYSCRAGSCSSCAGKVTAGNVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEE 94          
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_PORPU (Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 7.366e-32
Identity = 66/97 (68.04%), Postives = 76/97 (78.35%), Query Frame = -1
Query:  195 MAVYKVKLIGPD-GEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 482
            MA YK+ L+  D G +  FD  +D YILD+AE+AG+ELPYSCRAGACSTCAG +  GSVDQSD SFLDD Q+ KGYVLTCIAYP+SDC I TH E E
Sbjct:    1 MADYKIHLLSEDEGIDVTFDCSEDTYILDAAEEAGIELPYSCRAGACSTCAGKVTEGSVDQSDQSFLDDEQLLKGYVLTCIAYPESDCTILTHVEQE 97          
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_LEUGL (Ferredoxin OS=Leucaena glauca PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.366e-32
Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = -1
Query:  195 YKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 473
            +KVKL+ PDG + EF+ PDD YILD AE+ G+ELPYSCRAG+CS+CAG +V G +DQSD SFLDD Q+E+G+VLTC AYP+SD VI THKE E
Sbjct:    2 FKVKLLTPDGPK-EFECPDDVYILDQAEELGIELPYSCRAGSCSSCAGKLVEGDLDQSDQSFLDDEQIEEGWVLTCAAYPRSDVVIETHKEEE 93          
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_SPIMA (Ferredoxin OS=Spirulina maxima PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 9.620e-32
Identity = 64/95 (67.37%), Postives = 75/95 (78.95%), Query Frame = -1
Query:  201 MAVYKVKLIGP-DGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 482
            MA YKV LI   +G     D  DD YILD+AE+AG++LPYSCRAGACSTCAG + SGS+DQSD SFLDD+Q+E GYVLTC+AYP SDC I TH+E
Sbjct:    1 MATYKVTLISEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITSGSIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIQTHQE 95          
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_SOLAB (Ferredoxin OS=Solanum abutiloides PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.620e-32
Identity = 63/95 (66.32%), Postives = 77/95 (81.05%), Query Frame = -1
Query:  195 AVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 479
            A YKVKL+ PDG   EF+ PDD YILD AE+ G +LPYSCRAG+CS+CAG + +GSVDQSDG+FLDD+Q+  G+VLTC+AYP+SD  I THKE E
Sbjct:    1 ATYKVKLVTPDGPV-EFECPDDEYILDRAEEEGHDLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEE 94          
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_NOSMU (Ferredoxin OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 9.620e-32
Identity = 64/97 (65.98%), Postives = 79/97 (81.44%), Query Frame = -1
Query:  195 MAVYKVKLIGP-DGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 482
            MA +KV LI   +G ++E + PDD YILD+AE+ G +LP+SCRAGACSTCAG +VSG+VDQSD SFLDD+Q+E GYVLTC+AYP SD VI THKE +
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEEGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEED 97          
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_CHLFR (Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 9.620e-32
Identity = 65/97 (67.01%), Postives = 76/97 (78.35%), Query Frame = -1
Query:  195 MAVYKVKLIGP-DGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 482
            MA YKV LI   +G     +  DD YILD+AE+AG++LPYSCRAGACSTCAG + SG+VDQSD SFLDD+Q+E GYVLTC+AYP SDC I THKE E
Sbjct:    1 MATYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEE 97          
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.620e-32
Identity = 61/96 (63.54%), Postives = 80/96 (83.33%), Query Frame = -1
Query:  195 MAVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 482
            MA YKV L+ P+G++ E + PDD YILD+AE+AG++LPYSCRAG+CS+CAG + SGSV+Q DGSFLDD+Q+++G+VLTC+AYP  D  I THKE E
Sbjct:   51 MAAYKVTLVTPEGKQ-ELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEE 145          
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER1_ANASP (Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=petF PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 9.620e-32
Identity = 64/97 (65.98%), Postives = 79/97 (81.44%), Query Frame = -1
Query:  195 MAVYKVKLIGP-DGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 482
            MA +KV LI   +G ++E + PDD YILD+AE+ G +LP+SCRAGACSTCAG +VSG+VDQSD SFLDD+Q+E GYVLTC+AYP SD VI THKE +
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEED 97          
The following BLAST results are available for this feature:
BLAST of DN617310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER2_HYONI2.532e-3267.37Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_TOBAC5.640e-3267.37Ferredoxin OS=Nicotiana tabacum PE=1 SV=1[more]
FER_PORPU7.366e-3268.04Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2[more]
FER_LEUGL7.366e-3267.74Ferredoxin OS=Leucaena glauca PE=1 SV=1[more]
FER_SPIMA9.620e-3267.37Ferredoxin OS=Spirulina maxima PE=1 SV=2[more]
FER_SOLAB9.620e-3266.32Ferredoxin OS=Solanum abutiloides PE=1 SV=1[more]
FER_NOSMU9.620e-3265.98Ferredoxin OS=Nostoc muscorum PE=1 SV=2[more]
FER_CHLFR9.620e-3267.01Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2[more]
FER1_MESCR9.620e-3263.54Ferredoxin-1, chloroplastic OS=Mesembryanthemum cr... [more]
FER1_ANASP9.620e-3265.98Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617310 ID=DN617310; Name=DN617310; organism=Citrus sinensis; type=EST; length=563bp
TTTTTTCTCTCTACCATATGTTGCATATCATAAACATGAAAGACTTAACA
CCAAATGGTAATGAAAAAGTTCATCGTCACAAGTGAAATGGAAAGCATTT
GTTCAGACCGACTCACAATGATCTACTGCTTTAGCACAAATAGAAAGCAC
AAAGCAGAAAGCAAAAGCCAAGATCATAACATTATTTAGTTAAGTTCAGA
TTCCTTGTGTGTATAAATCACACAATCTGATTTTGGATATGCAATGCATG
TAAGGACATAACCTTTCTCCATCTGGTTATCATCAAGGAATGATCCATCT
GATTGGTCAACAGAGCCTGAAACCATCAGGCCAGCGCAAGTAGAGCAGGC
ACCAGCGCGGCATGAGTAGGGGAGCTCCATTCCGGCATCTTCAGCAGAGT
CGAGGATGTAAGCATCGTCGGGGGCATCAAACTCGTTTTCCTCTCCATCT
GGTCCAATTAGTTTCACTTTGTAAACTGCCATTGCAGATACTTTGAATGA
AGAAGACTTNCAGCCAAAAGCTTTTGAAACACTCCTGGAAACCAAGGAAC
GGGGGCTCTTGAC
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