DN617304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617304 vs. ExPASy Swiss-Prot
Match: SPCS3_CAEBR (Probable signal peptidase complex subunit 3 OS=Caenorhabditis briggsae GN=CBG22979 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.814e-16 Identity = 49/150 (32.67%), Postives = 78/150 (52.00%), Query Frame = 2 Query: 77 MHSFGYRANALLTFAVTILALMCAIASLSDNLNTPSPSAQIEILNINWFQKQPHGNDE-----VSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIP-AKEFAKFSIHTSNKYRFIDQG-HNLRGKEFNLTLHWHV 505 MH+ RAN+LL F + ++A + A LS + S +E+ +I + + D+ +L N+ D LF WN KQLF+++ AEY++ +NA+NQV +WD I+ A+ I KY F+D G H L+ L ++V Sbjct: 1 MHNLLSRANSLLAFTLWVMAAVTAACFLSTVFLDYTVSNHLEVNDIKIRNVRDYATDDKQADLATLAFNLKVDFSRLFNWNVKQLFVYLVAEYKSAENAVNQVVIWDRIVERAERVVMDEIGVKTKYYFLDDGAHLLKHDNVTFVLRYNV 150
BLAST of DN617304 vs. ExPASy Swiss-Prot
Match: SPCS3_CAEEL (Probable signal peptidase complex subunit 3 OS=Caenorhabditis elegans GN=K12H4.4 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.209e-15 Identity = 49/150 (32.67%), Postives = 74/150 (49.33%), Query Frame = 2 Query: 77 MHSFGYRANALLTFAVTILALMCAIASLSD-----NLNTPSPSAQIEILNINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIP-AKEFAKFSIHTSNKYRFIDQGHN-LRGKEFNLTLHWHV 505 MH+ RANALL F + ++A + A LS + T +++ N+ + D +L N+ D +F WN KQLF+++ AEY++ N +NQV LWD I+ A I +KY F+D G N L K L ++V Sbjct: 1 MHNLLSRANALLAFTLWVMAAVTAACFLSTVFLDYTVPTKLTVNDVKVRNVVDYATDEQQADLATLNFNLKVDFSKIFNWNVKQLFVYLVAEYKSKVNEVNQVVLWDRIVERADRVVMDEIGVKSKYYFLDDGTNLLNHKNVTFVLRYNV 150
BLAST of DN617304 vs. ExPASy Swiss-Prot
Match: SPCS3_DROME (Signal peptidase complex subunit 3 OS=Drosophila melanogaster GN=Spase22-23 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.395e-15 Identity = 47/150 (31.33%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 77 MHSFGYRANALLTFAVTILALM---CAIASLSDNLNTPSPSAQIEIL--NINWFQKQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSN-KYRFIDQGHNLR-GKEFNLTLHWHV 505 MH+ R NA + + +++LA + C ++++ + T + + +L N+ + +D +T ++ +L +F WN KQLF+++ AEY+TP N LNQV LWD II + A N KY F D G+ L+ + +L L W++ Sbjct: 1 MHTVLTRGNATVAYTLSVLACLTFSCFLSTVFLDYRTDANINTVRVLVKNVPDYGASREKHDLGFVTFDLQTNLTGIFNWNVKQLFLYLTAEYQTPANQLNQVVLWDKIILRGDNAVLDFKNMNTKYYFWDDGNGLKDNRNVSLYLSWNI 150 The following BLAST results are available for this feature:
BLAST of DN617304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617304 ID=DN617304; Name=DN617304; organism=Citrus sinensis; type=EST; length=507bpback to top |