DN617298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB5_BOVIN (Tubulin beta-5 chain OS=Bos taurus GN=TUBB5 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK++VCDIPPRGL MA TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB4_XENLA (Tubulin beta-4 chain OS=Xenopus laevis GN=tubb4 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 78/87 (89.66%), Postives = 86/87 (98.85%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB4_CHICK (Tubulin beta-4 chain OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB3_RAT (Tubulin beta-3 chain OS=Rattus norvegicus GN=Tubb3 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB3_MOUSE (Tubulin beta-3 chain OS=Mus musculus GN=Tubb3 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB3_MACFA (Tubulin beta-3 chain OS=Macaca fascicularis GN=TUBB3 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB3_HUMAN (Tubulin beta-3 chain OS=Homo sapiens GN=TUBB3 PE=1 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB3_CHICK (Tubulin beta-3 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 78/87 (89.66%), Postives = 86/87 (98.85%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB3_BOVIN (Tubulin beta-3 chain OS=Bos taurus GN=TUBB3 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK +VCDIPPRGL M+STFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB2_XENLA (Tubulin beta-2 chain OS=Xenopus laevis GN=tubb2 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.084e-42 Identity = 78/87 (89.66%), Postives = 86/87 (98.85%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430 The following BLAST results are available for this feature:
BLAST of DN617298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617298 ID=DN617298; Name=DN617298; organism=Citrus sinensis; type=EST; length=696bpback to top |