DN617298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_UNCNE (Tubulin beta chain OS=Uncinula necator PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.520e-39 Identity = 72/86 (83.72%), Postives = 82/86 (95.35%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV++++C IPPRGL M+STF+GNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV EYQQYQDA+ Sbjct: 344 WIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVHEYQQYQDAS 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB8B_HUMAN (Tubulin beta-8 chain B OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.520e-39 Identity = 74/87 (85.06%), Postives = 82/87 (94.25%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 W P+NVK++VCDIPPRGL M++TFIGN+ +IQE+F VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WFPDNVKTAVCDIPPRGLKMSATFIGNNAAIQELFTCVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB2_ERYPI (Tubulin beta-2 chain OS=Erysiphe pisi GN=TUB2 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 5.520e-39 Identity = 72/86 (83.72%), Postives = 82/86 (95.35%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV++++C IPPRGL M+STF+GNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV EYQQYQDA+ Sbjct: 344 WIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVHEYQQYQDAS 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_ACRCO (Tubulin beta chain OS=Acremonium coenophialum GN=TUB2 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.415e-39 Identity = 73/85 (85.88%), Postives = 81/85 (95.29%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNN+++++C IPPR L M+STFIGNSTSIQE+F+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA Sbjct: 344 WIPNNIQTALCAIPPRDLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB2_COLGR (Tubulin beta-2 chain OS=Colletotrichum graminicola GN=TUB2 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.415e-39 Identity = 72/85 (84.71%), Postives = 81/85 (95.29%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNNV++++C IPPRGL M+ TF+GNST+IQE+F+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA Sbjct: 344 WIPNNVQTALCSIPPRGLKMSFTFVGNSTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 428
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_MYCGR (Tubulin beta chain OS=Mycosphaerella graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.230e-38 Identity = 71/86 (82.56%), Postives = 83/86 (96.51%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV++++C IPPRGL M+STF+GNSTSIQE+F+RV +QF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A+ Sbjct: 344 WIPNNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRVGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAS 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVI (Tubulin beta-2 chain OS=Trichoderma viride GN=tub2 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.230e-38 Identity = 72/85 (84.71%), Postives = 82/85 (96.47%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNN+++++C IPPRGL M+STFIGNSTSIQE+F+RV EQF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A Sbjct: 344 WIPNNIQTALCAIPPRGLKMSSTFIGNSTSIQELFKRVGEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 428
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVE (Tubulin beta-2 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.230e-38 Identity = 72/85 (84.71%), Postives = 82/85 (96.47%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNN+++++C IPPRGL M+STFIGNSTSIQE+F+RV EQF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A Sbjct: 344 WIPNNIQTALCAIPPRGLKMSSTFIGNSTSIQELFKRVGEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 428
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_PHANO (Tubulin beta chain OS=Phaeosphaeria nodorum GN=tubA PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.606e-38 Identity = 69/86 (80.23%), Postives = 83/86 (96.51%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV++++C +PPRGL M++TF+GNSTSIQE+F+R+ +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A+ Sbjct: 344 WIPNNVQTALCSVPPRGLKMSATFVGNSTSIQELFKRIGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAS 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBBN_GUITH (Tubulin beta chain, nucleomorph OS=Guillardia theta GN=tubB PE=3 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.606e-38 Identity = 72/85 (84.71%), Postives = 80/85 (94.12%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIP+N+KSSVCDIPP+G+ M++ FIGNSTSIQE+F+RV EQF AMFRRKAFLHWYTGEGMDEMEFTEAESNM DLVSEYQQYQDA Sbjct: 344 WIPHNIKSSVCDIPPKGMKMSAAFIGNSTSIQELFKRVGEQFQAMFRRKAFLHWYTGEGMDEMEFTEAESNMQDLVSEYQQYQDA 428 The following BLAST results are available for this feature:
BLAST of DN617298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617298 ID=DN617298; Name=DN617298; organism=Citrus sinensis; type=EST; length=696bpback to top |